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COMPLEX V - beta subunit
COMPLEX I
13kDa-A   13kDa-B
15kDa
  18kDa
19kDa
  20kDa
23kDa   24kDa
30kDa
  39kDa
42kDa
  49kDa
51kDa   75kDa
ACP
  B8   B12
B14   B14.5a
B14.5b   B15
B16.6
  B17   B17.2
B18   B22   ASHI
MLRQ   MNLL
PDSW   SGDH

COMPLEX II

FP  
Fe-S
CYTb560
CYTb560 small


COMPLEX III
6.4kDa   7.2kDa
11kDa   14kDa
CYTC1   
CP1   CP2
Fe-S
  UQ-B.QP-C

COMPLEX IV
IV   Va   Vb   VIa
VIb
  VIc   VIIa   VIIc

COMPLEX V
alpha   beta
gamma
  delta
epsilon
   b   d   e
f
  g   OSCP
Cf6
  LBP

Peptide alignment
Identity = 97.6%     Similarity = 99.0%
   1
Dm MFALRAASKADKNLLPFLGQLSRSHAAKAA-KAAAAANGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRG
Dp MFALRAAAKADKNLLPFLGQLSRSHAAKAAVKAASVANGKIVAVIGAVVDVQFDDDLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRG

101
Dm QKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN
Dp QKVLDTGYPIRIPVGAETLGRIMNVIGEPIDERGPIPTDKTAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN

201
Dm VAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALL
Dp VAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALL

301
Dm GRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVAR
Dp GRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVAR

401
Dm GVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDYDHLPEVAFYMVGPIEEVVEKADR
Dp GVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEQTIKGFSQILAGEYDHLPEVAFYMVGPIEEVVEKADR

501
Dm LAKEAA
Dp LAKEAA
DNA alignment
Colour code:   UTRs    -   Coding   -   Intron(s)   -   NRG element(s)   -   Unknown
   1
Dm AATATATC---GCGACTACCGATTTGCTCATCACTAGGACTTCTGCTCGCCCGCACACTTCTC-AGTTAGTTCGAGAAAAATGTTCGCGTTACGTGCTGC
ATAT TC...G G C CG T T T CACT C C C CACA TT TC.AGTT C GAAAAATGTTCGCGTTACGTGCTGC
Dp TATATTTCTGAGGGTCGGACGGTATATTTTACACTGCACCCCACAAGCTAGCACACAATTTTCTAGTTCTCGCCCGAAAAATGTTCGCGTTACGTGCTGC

101
Dm ATCTAAAGCCGATAAGAATTTGCTGCCATTCTTGGGGCAATTGTGTAAGTAGCACAAAAATAAAAATTTTTAATTGATAACAATTGTATTAAATTGCGAA
CTAAAGCCGATAAGAATTTGCT CCATT TTGGGGCAATTGTGTAAGTA C A A .........T AT GATA A..TGTA TAAA T GA.
Dp CGCTAAAGCCGATAAGAATTTGCTTCCATTTTTGGGGCAATTGTGTAAGTACCTATTATAA---------TCATGGATATTA--TGTACTAAACTTGGA-

201
Dm GTTCAGCACAAAATATGTGCTTTGGCTAATAGCGCAATTGTCGAACATAACCTATCGTTCAATAAAATGTTACGAGCGAAAAAAAATATTACATAACAAT
..TC G CA A T .....................................................GT ACGA AA AA ATA A A......
.
Dp --TCGGGCCACAGTG-----------------------------------------------------GTGACGAAGAAAGCAACATAAAAGA-------

301
Dm TTTGAATGATTTAAGGTTACTTCTGTTTTATAACATATATAACAGTACTCAATTTAAACGACTTTTGAAAAAAAAAAAGATTTTTTTAGTCAGACATTTG
..................................AT T TAACA AC AA T AA G TG A A AA ATTT.................

Dp ----------------------------------ATGTGTAACATAACGTAACATTAATGCGAGATGGACATAACCTTAATTT-----------------

401
Dm CGTGTACGTCTTTCTGTAAGTTAACTAGGTATGTACATATATTGTATGCCGATATTGTTTGACGTTTTAAATTGAATAAATTTTTTTTTCGTTATATTGC
...............................................GC T TT T T ACG TT AAA AA AAAT TT T T........

Dp -----------------------------------------------GCGATTTTTCTCTTACGATTGAAAGGAAAAAAATGATTGCATAAT--------

501
Dm AATTGAATTCTTCACAAAGTATTTTGAAAATTAAAGTTACTTAAAAATTAAATTAATAATTAATAGTATAATATTAATTGTTCATCATTATCTTAAAAAA
AA TGAAT .............TTTGAAA T....TT CT A A A A T TA TT A TA A A T ATT..TCAT AT AT TTA A...

Dp AACTGAATG-------------TTTGAAATGT----TTCCTGAGAGACAATTGTCGTAGTTTGGATTAGAGCAATCATT--TCATTATCATGTTAGA---

601
Dm TAATATTAAAAATTGTCGATATTGATGCCCAAATTGTTACTGTTTAAGTTTTACGATGATGTATTCTACTAGTATCACTTTCGTTAAGTATAACATAAAT
............TTGTC AT TT TG.................................GTATT AC.......................A ATA A

Dp ------------TTGTCAATCTTTTTG---------------------------------GTATTTCAC-----------------------ATATACAG

701
Dm CTGTATATATTGGTATCTAGTGATAGGAAAATCAATAAACTGATAGTACTTTTTATTAAAAAATGATACCAATTAGCTTTACATATGGGGTATTAAGAAA
T TAT A T TAT A T TAG A T AA A AC .....TACTT ATTAAA A AT.....TT GCTT A A T A GAAA

Dp TTATATCCAGTTTTATAAATTTGTAGTGCAGTTAAAATACA-----TACTTCAAATTAAATGAGAAT-----TTTGCTTCATGGAATTTCTTAAATGAAA

801
Dm ACCTTTTCATACGCTGGCAATATAAATTAGCAAACTTTTCCGATCCCATAAATTTTATTCGATGATCAGGATCATCAGCCGAATGTGTTTTATTCATTCA
A TTT A TG.....ATA ATTA AA TTT...........AA TTTA TCG T T A GA TC........GTG TA TC T...

Dp AAGGTTTGAATTATTG-----ATATATTAAAAATTATTT-----------AAATTTAATCGTTCTTGAAGAAAGTC--------GTGACGTAATCTT---

901
Dm TTAAACAAATCAAGCATCTAATACAATGTTAGATACATATATATTTTTTTGCAAGCACCTGCTGCGGTGGCCTTCGACAAGTCCTGATTTTTTATTTACA
....ACA ATC A C AT A TA ATA TATATATT TT AA ...............................ATTT T AC

Dp ----ACACATCCATGTACATATGTATATATATATATGTATATATTCCTTGCGAAT-------------------------------ATTTCATCCAAACT

1001
Dm ATTATTCTCAAGAAGTAAGCTAGTTTTCTTTAAGTACGATTTTAAAAATATT-TGAATACATTTTTTAAAACTTACTAAGCAACTGCTCCGTTTTCAGCT
AT TTC AA AA TAA............TA A A TT A A ATAT .TGAA A ATTT....AA TT AA CA CT......TTTT AGCT
Dp ATCGTTCATAATAAATAA------------TAGTAAATAATTCATACATATCCTGAAGAGATTT----AATTTTTGAAACCATCT------TTTTTAGCT

1101
Dm CGTAGCCATGCTGCCAAGGCTGCA---AAGGCTGCAGCTGCCGCAAATGGAAAGATTGTGGCCGTAATTGGTGCAGTCGTCGATGTCCAGTTTGATGATA
CG AGCCATGC GC AAGGC GC ...AAGGC GC C G GC AA GGAAAGATTGT GC GTAATTGGTGC GTCGT GATGT CAGTT GATGAT
Dp CGCAGCCATGCCGCTAAGGCAGCTGTCAAGGCAGCCTCAGTTGCTAACGGAAAGATTGTTGCGGTAATTGGTGCTGTCGTTGATGTTCAGTTCGATGATG


1201
Dm ACTTACCGCCCATTCTGAATGCCTTGGAAGTAGACAACCGTTCTCCTCGGCTCGTGCTAGAGGTGGCCCAGCACTTGGGAGAAAATACCGTGCGCACTAT
ACTT CC CC ATT TGAATGC TTGGAAGT GACAACCG TC CC CG T GTGCT GA GTGGC CAGCACTTGGG GAAAA AC GTGCGCACTAT
Dp ACTTGCCACCAATTTTGAATGCTTTGGAAGTTGACAACCGCTCCCCACGTTTGGTGCTCGAAGTGGCTCAGCACTTGGGCGAAAACACTGTGCGCACTAT


1301
Dm CGCCATGGATGGTACCGAAGGCTTGGTTCGCGGACAGAAGGTTCTCGATACTGGGTATCCTATCCGAATTCCAGTTGGTGCCGAAACACTAGGACGCATC
GCCATGGATGGTAC GA GG TTGGTTCG GGACAGAAGGTTCTCGATACTGG TATCC ATCCG AT CCAGTTGGTGC GAAAC T GG CGCAT
Dp TGCCATGGATGGTACTGAGGGGTTGGTTCGTGGACAGAAGGTTCTCGATACTGGCTATCCGATCCGTATACCAGTTGGTGCTGAAACTTTGGGTCGCATT


1401
Dm ATTAATGTTATTGGTAAGTAAATTATA------------TTAAAACAT--AAGAAAGAAATTAAGAAATTCTTTGAA----CAGGTGAACCCATTGATGA
AT AA GTTATTGGTA GT ATA............TT A A AT..AA AA G AAT GAA T TTT .... AGG GAACC AT GATGA
Dp ATGAACGTTATTGGTATGTTTCAAATAAGTCACTCATAGTTTATAGATCGAACAATGTAATGTTGAATGTTTTTTTTATTTTAGGCGAACCTATCGATGA

1501
Dm GCGTGGACCAATTGATACAGACAAGACCGCTGCCATTCATGCTGAGGCTCCTGAATTCGTTCAGATGTCTGTTGAGCAAGAGATTCTTGTCACTGGAATC
CGTGG CC ATT AC GA AAGACCGC CCATTCA GC GA GCTCC GA TT TT A ATGTC GTTGAGCAAGAGATTCT GTCAC GG AT

Dp ACGTGGGCCGATTCCAACTGATAAGACCGCCCCCATTCACGCAGAAGCTCCAGAGTTTATTGAAATGTCCGTTGAGCAAGAGATTCTCGTCACCGGCATT

1601
Dm AAAGTCGTCGATCTCCTGGCTCCATACGCCAAAGGTGGTAAAATTGGGTTGTTTGGAGGTGCCGGTGTGGGCAAAACTGTGTTGATCATGGAGCTCATTA
AAAGT GTCGATCT CTGGC CC TA GCCAA GG GGTAA ATTGG TGTTTGG GG GC GG GT GGCAA ACTGTG TGAT ATGGAGCT AT A

Dp AAAGTGGTCGATCTTCTGGCACCCTATGCCAAGGGCGGTAAGATTGGTCTGTTTGGTGGCGCTGGAGTCGGCAAGACTGTGCTGATTATGGAGCTGATCA

1701
Dm ACAACGTGGCTAAAGCTCATGGTGGATACTCGGTTTTCGCGGGAGTTGGTGAACGCACTCGTGAGGGAAACGATTTATACAATGAGATGATCGAGGGTGG
ACAACGT GC AAAGC CA GG GG TACTC GTTTTCGC GGAGT GG GA CGCAC CG GAGGGAAA GA TT TACAATGA ATGAT GA GGTGG

Dp ACAACGTAGCAAAAGCCCACGGCGGTTACTCTGTTTTCGCCGGAGTAGGCGAGCGCACCCGCGAGGGAAATGACTTGTACAATGAAATGATTGAAGGTGG

1801
Dm TGTTATTTCACTAAAGGACAAGACCTCAAAGGTGGCTCTCGTATATGGGCAAATGAACGAGCCGCCAGGTGCTCGTGCCCGTGTTGCTCTAACTGGACTG
TGT ATTTC CT AAGGA AAGAC TC AAGGTGGCTCT GT TATGGGCAAATGAACGAGCC CCAGG GC CG GC CGTGT GCTCT ACTGG CT

Dp TGTCATTTCCCTCAAGGATAAGACATCTAAGGTGGCTCTTGTCTATGGGCAAATGAACGAGCCCCCAGGCGCCCGAGCTCGTGTGGCTCTTACTGGTCTC

1901
Dm ACCGTTGCAGAGTACTTCCGTGATCAAGAAGGACAGGATGTGTTGCTGTTTATCGACAACATTTTCCGATTTACTCAAGCTGGCTCAGAAGTGTCCGCTT
AC GT GC GAGTA TTCCGTGATCA GA GGACAGGATGTGTTGCT TTTAT GACAACATTTTCCG TTTACTCAAGCTGGCTC GAAGTGTCCGC T

Dp ACTGTGGCCGAGTATTTCCGTGATCAGGAGGGACAGGATGTGTTGCTTTTTATTGACAACATTTTCCGGTTTACTCAAGCTGGCTCTGAAGTGTCCGCCT

2001
Dm TGTTGGGTCGTATTCCCTCAGCCGTCGGTTACCAGCCAACCTTGGCTACCGACATGGGTTCTATGCAGGAGCGTATTACCACCACCAAAAAGGGATCCAT
TGTTGGGTCGTATTCC TC GCCGTCGG TACCAGCC AC TTGGCTAC GACATGGGTTCTATGCAGGAGCGTATTACCACCAC AA AAGGGATC AT

Dp TGTTGGGTCGTATTCCATCGGCCGTCGGCTACCAGCCCACTTTGGCTACTGACATGGGTTCTATGCAGGAGCGTATTACCACCACTAAGAAGGGATCTAT

2101
Dm TACTTCTGTTCAGGCCATATATGTGCCCGCTGATGATTTGACCGATCCTGCTCCTGCTACTACATTCGCTCATTTGGATGCCACCACTGTACTCTCGCGT
AC TCTGT CAGGC AT TATGT CC GCTGATGATTT AC GATCC GCTCC GCTAC AC TTCGCTCATTTGGA GCCAC ACTGTACT TC CGT

Dp CACCTCTGTACAGGCTATTTATGTACCAGCTGATGATTTAACTGATCCCGCTCCAGCTACAACTTTCGCTCATTTGGACGCCACTACTGTACTGTCACGT

2201
Dm GCGATTGCCGAACTGGGTATTTACCCTGCTGTGGATCCACTGGATTCGACTTCTCGAATCATGGATCCCAACATCATTGGCCAAGAACACTATAACGTTG
GC ATTGC GAA T GGTAT TA CCTGC GT GATCC CT GATTC ACTTCTCG AT ATGGA CC AACATCATTGG CAAGAACACTA AACGTTG

Dp GCTATTGCTGAATTAGGTATATATCCTGCAGTCGATCCGCTTGATTCCACTTCTCGTATTATGGACCCTAACATCATTGGACAAGAACACTACAACGTTG

2301
Dm CCCGTGGTGTGCAGAAAATCTTGCAAGACTACAAATCACTTCAGGATATAATAGCCATTCTCGGAATGGATGAGTTGTCTGAGGAAGATAAGCTCACAGT
C CGTGGTGTGCA AA ATCTTGCAAGA TA AAATC CTTCAGGATAT AT GCCAT T GG ATGGATGA T TCTGAGGAAGA AA CT ACAGT

Dp CTCGTGGTGTGCAAAAGATCTTGCAAGATTATAAATCTCTTCAGGATATTATTGCCATCTTAGGCATGGATGAACTTTCTGAGGAAGACAAACTAACAGT

2401
Dm CGCTCGTGCTCGCAAGATTCAGCGTTTCTTGTCGCAGCCATTCCAAGTTGCTGAAGTCTTCACCGGGCATGCTGGTAAACTAGTGCCCCTGGAGCAAACT
CGC CGTGC CGCAAGAT CA CG TTCTTGTCGCAGCCATTCCA GT GCTGAAGTCTT ACCGG CATGCTGGTAAACT GT CC TGGA CAAAC

Dp CGCGCGTGCACGCAAGATCCAACGCTTCTTGTCGCAGCCATTCCAGGTCGCTGAAGTCTTTACCGGACATGCTGGTAAACTGGTTCCATTGGAACAAACC

2501
Dm ATAAAAGGTTTCTCAGCAATTCTAGCTGGGGACTACGACCATCTACCTGAAGTTGCTTTCTACATGGTCGGCCCAATCGAAGAAGTTGTAGAAAAGGCTG
AT AA GG TTCTCA ATTCT GCTGG GA TA GA CATCT CC GAAGTTGCTTTCTACATGGT GGCCCAAT GAAGAAGT GT GA AAGGCTG

Dp ATTAAGGGCTTCTCACAGATTCTGGCTGGCGAATATGATCATCTGCCGGAAGTTGCTTTCTACATGGTTGGCCCAATTGAAGAAGTAGTTGAGAAGGCTG

2601
Dm ACCGCCTGGCAAAGGAAGCTGCCTAGATAGGCGTACTGGAAAAATCTTCAAAGTCAGCAAATCTATCATTGAATATTATGCATTGAATTTGTAATAAACT
A CG CTGGCAAAGGAAGCTGCCTA TA ACTGGAA A..............C AAT A TGAAT..TATGCATTGAA TT TAATA AC
Dp ATCGTCTGGCAAAGGAAGCTGCCTAAGTAATTACACTGGAATA--------------CGAATAATAAAGTGAAT--TATGCATTGAAGTTTTAATAGACA

2701
Dm TTGTAAGATCAAATTAAATTCAATACAAGCGAAGAAAAAGTTAATAAAACCTATTTAAACATTA
TGTAA ATCAA TTAAATTC ATA A G GAAGAA ...T AATAAAAC TATTTAAA TA
Dp CTGTAACATCAACTTAAATTCTATAAACGAGAAGAAC---TCAATAAAACGTATTTAAATCATA