d

COMPLEX I 13kDa-A 13kDa-B 15kDa 18kDa 19kDa 20kDa 23kDa 24kDa 30kDa 39kDa 42kDa 49kDa 51kDa 75kDa ACP B8 B12 B14 B14.5a B14.5b B15 B16.6 B17 B17.2 B18 B22 ASHI MLRQ MNLL PDSW SGDH COMPLEX II FP Fe-S CYTb560 CYTb560 small COMPLEX III 6.4kDa 7.2kDa 11kDa 14kDa CYTC1 CP1 CP2 Fe-S UQ-B.QP-C COMPLEX IV IV Va Vb VIa VIb VIc VIIa VIIc COMPLEX V alpha beta gamma delta epsilon b d e f g OSCP Cf6 LBP	Peptide alignment
Identity = 89.3% Similarity = 94.4%
1 Dm MAARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAGLVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSE Dp MAARRITQSSINWSALAERVPANQKTSFGAFKTKSDIYVRAVMANPECPPKIDWAYYKKLVPVAGLVDGFQKQYEALTVPYPKDTVSPQVDAQIKESQSE 101 Dm IDAYKKASEQRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPLNKPTFWPHTPEEQVGYKSKEQLEAEAQGHH Dp IASYKKVSEQRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPINRPTFWPHTPEEQVGYKSKEQIEAEKQGHH
DNA alignment
Colour code: UTRs - Coding - Intron(s) - NRG element(s) - Unknown
1 Dm CTGGTCACATTCGTACTCAAAGTGTAAGTGTTGGTTGCAGAGGCAGAAATTCTTATTTTTCTCCTTGAAAATATAAGTACGTTACGTTAAACACTGCAAA T GTCACA T T ..AAAGTGTAAGTGTTGGT.GCAGAGGCA A A T T TTCTCC T...AAT TAAGTACGTT ...........G AA Dp TTAGTCACACTGCTCA--AAAGTGTAAGTGTTGGT-GCAGAGGCATAGAAATTCTTAATTCTCCGT---AATTTAAGTACGTTG-----------GAAAT 101 Dm AATAATAAAAAAAAAGCGCACGGTTGGGCTACAACAGCGAT------TAGTCTGCAAGCCTCGAGGAAAGGACTGCAAACGCGTTTTTAGTTTGAA---- AA AT AAAA A G A G TG GC ACAA A A ......TA GC AGCC G AGGA CAAA G T A TTT .... Dp AACTATCTAAAACCACTGAAGTGATGTGCAACAAGACATAACTAAACTAAATGGCTAGCCAATTGTGGAGGAACCCAAAAGAATGCACACTTTTCCCACC 201 Dm ----------GGAACATTGAGGATTGAAAAAAATTACATAATTTTTGCGAGCATAACTCGCCGTGCATTATGTCGATAAGTCTGCA-ACTAAAGAAGCAG ..........GGA T G G T A AAAATTACATAATTTTTGC GCATAA T C GTG A T A A T A.A T AGAAG G Dp TTCAAAATTTGGAGGGTGGCTGCTGCAGCAAAATTACATAATTTTTGCACGCATAATTTTCAGTGGAATGGAAACAGCATAATATATAATGCAGAAGATG 301 Dm AGATT---ACATTTCAACTAATAAGAATATCGCTGCACAGTTCCAGGACACCTAGAAATCACTTACCACCTCTATAAACCCA---AAAACCTAACCTCAT GA T...ACAT CAA A A GAA .....T A A T A G A CT G T C T C T AT C C ...A AACCTAACCTCAT Dp GGACTCTAACATCACAATCCACAGGAAA-----TAGATATATTTATGGAATCTCGTCTTGGCATTGCTTTTTCATTTCCACTTTGAGAACCTAACCTCAT 401 Dm CCCC-----GCTTTTGTTGTTGTCTTGCAGTATCTGTGC---AGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTGGTCCGCTCTCGCCGAGC C .....G TTTTGTTG T T TT.CAGTAT TGTGC...AGAATGGCCGC CGCCG ATC CCCAATCCTCGAT AACTGGTC GCTCT GCCGAGC Dp CAGTTTTGTGTTTTTGTTGGTTTTTT-CAGTATTTGTGCTACAGAATGGCCGCTCGCCGCATCACCCAATCCTCGATAAACTGGTCTGCTCTGGCCGAGC 501 Dm GCGTGCCCGCCAACCAGAAGAGCAGCTTCGGCGCCTTCAAGACCAAGTCGGACATCTATGTGCGCGCCGTGCTGGCCAATCCCGAGTGCCCACCCCAGAT G GTGCCCGCCAACCAGAAGA CAGCTTCGGCGCCTTCAAGACCAAGTCGGACATCTATGTGCGCGCCGTG TGGCCAATCCCGAGTGCCCACC AGAT Dp GTGTGCCCGCCAACCAGAAGACCAGCTTCGGCGCCTTCAAGACCAAGTCGGACATCTATGTGCGCGCCGTGATGGCCAATCCCGAGTGCCCACCAAAGAT 601 Dm CGATTGGGCCAACTACAAGAAGCTTGTGCCAGTGGCCGGACTCGTCGATAGCTTCCAGAAGCAGTACGAAGCCCTGAAGGTGCCCTATCCCCAGGACAAG GATTGGGCC ACTACAAGAAGCT GTGCC GTGGCCGG CT GTCGAT GCTTCCAGAAGCAGTACGA GC CTGA GTGCCCTATCCC AGGACA Dp TGATTGGGCCTACTACAAGAAGCTGGTGCCTGTGGCCGGCCTGGTCGATGGCTTCCAGAAGCAGTACGAGGCTCTGACCGTGCCCTATCCCAAGGACACT 701 Dm GTGTCGTCCCAGGTGGATGCCGAGATCAAGGCGTCGCAGAGCGAAATCGATGCCTACAAGAAGGCCTCGGAGCAGCGCATTCAGAACTACCAAAAGGAGA GT TC CCCAGGTGGA GCC AGATCAAGG GTCGCAG GA AT G T C TACAAGAAGG CTCGGAGCAGCGCAT CAGAACTACCA AAGGAGA Dp GTTTCCCCCCAGGTGGACGCCCAGATCAAGGAGTCGCAGTCGGAGATTGCTTCTTACAAGAAGGTCTCGGAGCAGCGCATCCAGAACTACCAGAAGGAGA 801 Dm TCGCCCATCTCAAGTCTCTGCTGCCCTACGACCAGATGACCATGGAGGACTACCGCGACGCATTCCCCGATAGCGCACTCGATCCCCTCAACAAGCCCAC TCGCCCATCT AAGTC CTGCTGCC TACGACCAGATGACCATGGAGGACTACCG GA GCATTCCCCGA AGCGC CT GA CCC TCAACA CC AC Dp TCGCCCATCTGAAGTCGCTGCTGCCATACGACCAGATGACCATGGAGGACTACCGTGATGCATTCCCCGACAGCGCCCTGGACCCCATCAACAGACCAAC 901 Dm CTTCTGGCCCCACACTCCCGAGGAGCAGGTCGGCTACAAGTCCAAGGAGCAGCTGGAGGCCGAAGCCCAGGGACACCACTAAACCGGAGCGCACGAGGAG CTTCTGGCC CACAC CCCGAGGAGCAGGTCGGCTACAAGTCCAAGGAGCAG T GAGGCCGA CAGGGACACCA TAA A C A G G Dp CTTCTGGCCTCACACCCCCGAGGAGCAGGTCGGCTACAAGTCCAAGGAGCAGATCGAGGCCGAGAAACAGGGACACCATTAAGTGTCACTCCCTCAAGCG 1001 Dm CACTCTGACACTGGCTTCGTTGGTCGTCTGTTCGATTCGAAATGTAATC---CGCGTTGAAGTAAATTACCCAAATTAAATTCATTTCAAATGA .....GA A G CT..................ATTCGAAATGTAA ...C G T AAG AAATTAC CAAATTAAA TCATTTCAAATG Dp A-----GAAAGCGCCT------------------ATTCGAAATGTAAATGAACATGCTAAAGCAAATTACACAAATTAAAGTCATTTCAAATGG

COMPLEX I
13kDa-A 13kDa-B
15kDa 18kDa
19kDa 20kDa
23kDa 24kDa
30kDa 39kDa
42kDa 49kDa
51kDa 75kDa
ACP B8 B12
B14 B14.5a
B14.5b B15
B16.6 B17 B17.2
B18 B22 ASHI
MLRQ MNLL
PDSW SGDH

COMPLEX II
FP Fe-S
CYTb560
CYTb560 small

COMPLEX III
6.4kDa 7.2kDa
11kDa 14kDa
CYTC1 CP1 CP2
Fe-S UQ-B.QP-C

COMPLEX IV
IV Va Vb VIa
VIb VIc VIIa VIIc

COMPLEX V
alpha beta
gamma delta
epsilon b d e
f g OSCP
Cf6 LBP

Peptide alignment

Identity = 89.3% Similarity = 94.4%

   1
Dm MAARRIAQSSINWSALAERVPANQKSSFGAFKTKSDIYVRAVLANPECPPQIDWANYKKLVPVAGLVDSFQKQYEALKVPYPQDKVSSQVDAEIKASQSE
Dp MAARRITQSSINWSALAERVPANQKTSFGAFKTKSDIYVRAVMANPECPPKIDWAYYKKLVPVAGLVDGFQKQYEALTVPYPKDTVSPQVDAQIKESQSE
 
   101
Dm IDAYKKASEQRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPLNKPTFWPHTPEEQVGYKSKEQLEAEAQGHH
Dp IASYKKVSEQRIQNYQKEIAHLKSLLPYDQMTMEDYRDAFPDSALDPINRPTFWPHTPEEQVGYKSKEQIEAEKQGHH

DNA alignment

Colour code: UTRs - Coding - Intron(s) - NRG element(s) - Unknown

   1
Dm CTGGTCACATTCGTACTCAAAGTGTAAGTGTTGGTTGCAGAGGCAGAAATTCTTATTTTTCTCCTTGAAAATATAAGTACGTTACGTTAAACACTGCAAA
    T GTCACA T  T  ..AAAGTGTAAGTGTTGGT.GCAGAGGCA A A   T  T  TTCTCC T...AAT TAAGTACGTT ...........G AA 
Dp TTAGTCACACTGCTCA--AAAGTGTAAGTGTTGGT-GCAGAGGCATAGAAATTCTTAATTCTCCGT---AATTTAAGTACGTTG-----------GAAAT
 
   101
Dm AATAATAAAAAAAAAGCGCACGGTTGGGCTACAACAGCGAT------TAGTCTGCAAGCCTCGAGGAAAGGACTGCAAACGCGTTTTTAGTTTGAA----
   AA  AT  AAAA  A  G A  G TG GC ACAA A   A ......TA    GC AGCC    G   AGGA   CAAA G  T    A TTT   ....
Dp AACTATCTAAAACCACTGAAGTGATGTGCAACAAGACATAACTAAACTAAATGGCTAGCCAATTGTGGAGGAACCCAAAAGAATGCACACTTTTCCCACC
 
   201
Dm ----------GGAACATTGAGGATTGAAAAAAATTACATAATTTTTGCGAGCATAACTCGCCGTGCATTATGTCGATAAGTCTGCA-ACTAAAGAAGCAG
   ..........GGA   T G  G T  A  AAAATTACATAATTTTTGC  GCATAA T  C GTG A T      A  A   T  A.A T  AGAAG  G
Dp TTCAAAATTTGGAGGGTGGCTGCTGCAGCAAAATTACATAATTTTTGCACGCATAATTTTCAGTGGAATGGAAACAGCATAATATATAATGCAGAAGATG
 
   301
Dm AGATT---ACATTTCAACTAATAAGAATATCGCTGCACAGTTCCAGGACACCTAGAAATCACTTACCACCTCTATAAACCCA---AAAACCTAACCTCAT
    GA T...ACAT  CAA   A A GAA .....T  A A  T  A G  A CT G   T  C T  C   T  AT   C C ...A AACCTAACCTCAT
Dp GGACTCTAACATCACAATCCACAGGAAA-----TAGATATATTTATGGAATCTCGTCTTGGCATTGCTTTTTCATTTCCACTTTGAGAACCTAACCTCAT
 
   401
Dm CCCC-----GCTTTTGTTGTTGTCTTGCAGTATCTGTGC---AGAATGGCCGCCCGCCGTATCGCCCAATCCTCGATCAACTGGTCCGCTCTCGCCGAGC
   C   .....G TTTTGTTG T T TT.CAGTAT TGTGC...AGAATGGCCGC CGCCG ATC CCCAATCCTCGAT AACTGGTC GCTCT GCCGAGC
Dp CAGTTTTGTGTTTTTGTTGGTTTTTT-CAGTATTTGTGCTACAGAATGGCCGCTCGCCGCATCACCCAATCCTCGATAAACTGGTCTGCTCTGGCCGAGC
 
   501
Dm GCGTGCCCGCCAACCAGAAGAGCAGCTTCGGCGCCTTCAAGACCAAGTCGGACATCTATGTGCGCGCCGTGCTGGCCAATCCCGAGTGCCCACCCCAGAT
   G GTGCCCGCCAACCAGAAGA CAGCTTCGGCGCCTTCAAGACCAAGTCGGACATCTATGTGCGCGCCGTG TGGCCAATCCCGAGTGCCCACC  AGAT
Dp GTGTGCCCGCCAACCAGAAGACCAGCTTCGGCGCCTTCAAGACCAAGTCGGACATCTATGTGCGCGCCGTGATGGCCAATCCCGAGTGCCCACCAAAGAT
 
   601
Dm CGATTGGGCCAACTACAAGAAGCTTGTGCCAGTGGCCGGACTCGTCGATAGCTTCCAGAAGCAGTACGAAGCCCTGAAGGTGCCCTATCCCCAGGACAAG
    GATTGGGCC ACTACAAGAAGCT GTGCC GTGGCCGG CT GTCGAT GCTTCCAGAAGCAGTACGA GC CTGA  GTGCCCTATCCC AGGACA  
Dp TGATTGGGCCTACTACAAGAAGCTGGTGCCTGTGGCCGGCCTGGTCGATGGCTTCCAGAAGCAGTACGAGGCTCTGACCGTGCCCTATCCCAAGGACACT
 
   701
Dm GTGTCGTCCCAGGTGGATGCCGAGATCAAGGCGTCGCAGAGCGAAATCGATGCCTACAAGAAGGCCTCGGAGCAGCGCATTCAGAACTACCAAAAGGAGA
   GT TC  CCCAGGTGGA GCC AGATCAAGG GTCGCAG   GA AT G T C TACAAGAAGG CTCGGAGCAGCGCAT CAGAACTACCA AAGGAGA
Dp GTTTCCCCCCAGGTGGACGCCCAGATCAAGGAGTCGCAGTCGGAGATTGCTTCTTACAAGAAGGTCTCGGAGCAGCGCATCCAGAACTACCAGAAGGAGA
 
   801
Dm TCGCCCATCTCAAGTCTCTGCTGCCCTACGACCAGATGACCATGGAGGACTACCGCGACGCATTCCCCGATAGCGCACTCGATCCCCTCAACAAGCCCAC
   TCGCCCATCT AAGTC CTGCTGCC TACGACCAGATGACCATGGAGGACTACCG GA GCATTCCCCGA AGCGC CT GA CCC TCAACA  CC AC
Dp TCGCCCATCTGAAGTCGCTGCTGCCATACGACCAGATGACCATGGAGGACTACCGTGATGCATTCCCCGACAGCGCCCTGGACCCCATCAACAGACCAAC
 
   901
Dm CTTCTGGCCCCACACTCCCGAGGAGCAGGTCGGCTACAAGTCCAAGGAGCAGCTGGAGGCCGAAGCCCAGGGACACCACTAAACCGGAGCGCACGAGGAG
   CTTCTGGCC CACAC CCCGAGGAGCAGGTCGGCTACAAGTCCAAGGAGCAG T GAGGCCGA    CAGGGACACCA TAA     A   C   A G G
Dp CTTCTGGCCTCACACCCCCGAGGAGCAGGTCGGCTACAAGTCCAAGGAGCAGATCGAGGCCGAGAAACAGGGACACCATTAAGTGTCACTCCCTCAAGCG
 
   1001
Dm CACTCTGACACTGGCTTCGTTGGTCGTCTGTTCGATTCGAAATGTAATC---CGCGTTGAAGTAAATTACCCAAATTAAATTCATTTCAAATGA
    .....GA A  G CT..................ATTCGAAATGTAA  ...C  G T AAG AAATTAC CAAATTAAA TCATTTCAAATG 
Dp A-----GAAAGCGCCT------------------ATTCGAAATGTAAATGAACATGCTAAAGCAAATTACACAAATTAAAGTCATTTCAAATGG