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COMPLEX II - Flavoprotein
COMPLEX I
13kDa-A   13kDa-B
15kDa
  18kDa
19kDa
  20kDa
23kDa   24kDa
30kDa
  39kDa
42kDa
  49kDa
51kDa   75kDa
ACP
  B8   B12
B14   B14.5a
B14.5b   B15
B16.6
  B17   B17.2
B18   B22   ASHI
MLRQ   MNLL
PDSW   SGDH

COMPLEX II

FP  
Fe-S
CYTb560
CYTb560 small


COMPLEX III
6.4kDa   7.2kDa
11kDa   14kDa
CYTC1   CP1   CP2
Fe-S
  UQ-B.QP-C

COMPLEX IV
IV   Va   Vb   VIa
VIb
  VIc   VIIa   VIIc

COMPLEX V
alpha   beta
gamma
  delta
epsilon
   b   d   e
f
  g   OSCP
Cf6
  LBP

Peptide alignment
Identity = 94.1%     Similarity = 97.7%
   1
Dm MSGIMRVPSILAKNAVASMQRAAAVGVQRSYHITHGRQQASAANPDKISKQYPVVDHAYDAIVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAA
Dp MSGIMRVPSILAKNAVVSMQRAAAIAGQRSYHITHGRQQATAANPDKISKQYPVVDHAYDAVVVGAGGAGLRAAFGLVAEGFRTAVITKLFPTRSHTIAA

101
Dm QGGINAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLKFGKGGQAHRCCAVADRTGHSLLHT
Dp QGGINAALGNMEEDDWKWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTQDGKIYQRAFGGQSLKFGKGGQAHRCCAVADRTGHSLLHT

201
Dm LYGQSLSYDCNYFVEYFALDLIFEDGECRGVLALNLEDGTLHRFRAKNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGA
Dp LYGQSLSYDCNYFVEYFALDLIFEDGECRGVLALNLEDGTLHRFRAQNTVIATGGYGRAFFSCTSAHTCTGDGTAMVARQGLPSQDLEFVQFHPTGIYGA

301
Dm GCLITEGCRGEGGYLINGNGERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGAGPEKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPVL
Dp GCLITEGCRGEGGYLINAKGERFMERYAPVAKDLASRDVVSRSMTIEIMEGRGVGPDKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPVL

401
Dm PTVHYNMGGVPTNYRGQVITIDKDGKDVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAELNKPGAPAPTLKENAGEASVANLDKLRHA
Dp PTVHYNMGGVPTNYRGQVITVDKDGKDIIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAEENKPGAAAPTLKDTAGEASVANLDKLRFA

501
Dm NGQITTADLRLKMQKTMQHHAAVFRDGPILQDGVNKMKEIYKQFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHAREDFKVRED
Dp NGQITTADLRLKMQKTMQHHAAVFRDGPILKEGVSKMQEIYKQFKDVKVVDKSLVWNSDLVETLELQNLLANAQMTIVGAEARKESRGAHAREDFKIRLD

601
Dm EYDFSKPLDGQQKKPMDQHWRKHTLSWVCNDNGDITLDYRNVIDTTLDNEVSTVPPAIRSY
Dp EYDYSKPVEGQEKVPFEKHWRKHTLAWVCNDNGDVQLDYRNVIDTTLDNEVSTVPPAIRSY
DNA alignment
Colour code:   UTRs    -   Coding   -   Intron(s)   -   NRG element(s)   -   Unknown
   1
Dm ATTGAGCGAGTCAGTGAACCGAACTGCAGTGCCGACGAGCGGCAGTTCACACACAACATTTGAAAGTTTGTAAACTTTTCCTTTTTCGATCACATAGACA
ATT A C AG .....C AACT AGTGCCGACGAGCGGCA.......CACAACATTT AAA ...GTAAACTTTTCCTTT AT..........
Dp ATTCATCCAGCTC-----CGTAACTCAAGTGCCGACGAGCGGCA-------CACAACATTTAAAAC---GTAAACTTTTCCTTTCAAAAT----------

101
Dm CATCGATACACGTAGTTATTTGTTTTTATTTTGTACCAACACCAAACACCCCATCTTACAAGCGCGTAAAACCTCGTTTTCGGTCCAATCTCTTGCAGAA
.....A ACA GTA TA TG TTT A AACA CAA C T TA A AAA..........G CCA TCT TTGCAGAA
Dp -----AGACATGTAACTACATGACAAATATTTTAAGAAACATCAACGCGTACGTACTAAATTTTGACTAAA----------GTGCCACTCTTTTGCAGAA

201
Dm TCTTG------CAGTAGAACCTCACAGCCCAGCC--AAACATGTCCGGAATCATGCGTGTGCCATCGATTTTGGCCAAAAATGCAGTCGCCTCCATGGTA
TC G......C A C A AGCCCAGCC..AAACATGTCCGGAATCATGCGTGTGCCATCGATTTTGGCCAAAAATGCAGTCG CTCCATGGTA
Dp TCAAGACCACACTAGCCACCTCGAAAGCCCAGCCGCAAACATGTCCGGAATCATGCGTGTGCCATCGATTTTGGCCAAAAATGCAGTCGTCTCCATGGTA

301
Dm AGTAGTCCCCATTTTGGAAGTGAAA---ACCCAGGCTCCTCTGTGGCAAACGAAATGATTTAAGAGTGGTTATACAACCGGGTCTACACAGAACCCAGCC
GTAG C AT T G A...A CCA C C A T T A AG G TTATACAAC GG .......AAC A
Dp GGTAGCGCATATACTCCTTTCGCCAGGCATCCACATCGTCGCCCACCTGTCCACCTTGTCGGACAGCGATTATACAACGAGGGA-------AACGGATTT

401
Dm AGCCAGCTCGTGATGTGACAACAGAAAAAGACCAACGAATTGGCCAAAAACGCGCCACCCGTACTTGTGTTATGTAATTTGTGAGCAAATTGTGGGACAC
GCTCGTGA GTGA A AAAA A T C AAAAACGCGCC C CGTA TT TGT AT T A T .......AATT TG C
Dp TATTTGCTCGTGACGTGAAGTGAAAAAATCTTAAGAAGTTGACCAAAAAACGCGCCCCTCGTAGTTATGTAATTTCAATC-------AATTTTGATGGCC

501
Dm AGGTGCATTAAATTATTCCCTTTGCTAGATTATATTAATTTTCATATAGCGAATATCATTCCAAGCAAGTGTTCAGCAATTTTGCGGATTTTATAGTGGA
AGGTG A T AT CC T ...AGA T AT A GC A T T T C TC G T TT A TT TAGTGGA
Dp AGGTGTAATGGATGGCCCCACTC---AGAGTTAATATTCCAGAAGGGGGCAACTGTTGATTTTGCCCCCATCTCTGGGCTGTTTTTAAGATTTTAGTGGA

601
Dm AAGCTAGGTGTGCAC---CAGCGAGGTTATGTTATGCTGCCGCCCCGCCCCCTTCATCCATGCTCTCCTGCATCGACGATATCGTGCATTTGGGCATTTC
AA T G T AC...C CGAGGTTATGTTA ....C GCCCCGCCCCC TC ATGCT TC TG T G G T T T A T..GGC T C
Dp AAATTTGTGTTCAACGGTCGACGAGGTTATGTTAC----CTGCCCCGCCCCCGCTGTCGATGCTTTCGTGTTTTGTTGGTCTGCTCGAAT--GGCTGTGC

701
Dm GTGCAACAAA-----------------ATGCAGTTGAAA-----------CACTTGGTTTTGGATGCACGACACGCCTTGAAAAGCTTTATAAGTACCGC
GTGCAACAAA.................ATGCA TTG AA...........C T G T T G T A GACA GCCTTGA AAGCT AA T C
Dp GTGCAACAAATGCATCTAAGACATTAAATGCAATTGCAAATTGTGTATGACGGTGGCTCATTGCTATAGGACAAGCCTTGATAAGCTCAGCAAATTTCAT

801
Dm TTAATCGGAAGATTCACAAAAGAGAGGATAGTAGTATATAGTAAATCAAATGATTGGCAAGCGGAGAGAGCAAGCGAGAGAGAGAGAGAGATGGAGGCAC
T A TC A GA T C A............................................................GAGA AG GA G A G C
Dp TCAGTCACACGAATGTCCA------------------------------------------------------------GAGATGCAGGGAGGCACGGCC

901
Dm GTCACAGAACTAACAGCTGATTATACAATGGAGCTAATTGATCGCCGTGCTGATCTACCCCGCCCCCTTCCACCAAAAAACCCCGGCCGAAAAATGCCAG
G C A AGCTGATTATACAATGG AT GC ...........................................A ATG C
Dp GCGGCTAACAACTGAGCTGATTATACAATGGGAGCTGGCCATTGCT-------------------------------------------ACTGATGTCTC

1001
Dm TTCAATTATTTCATTTGTTTATTACATAAGCAGTTATCACTGCAAGTCGCTCTTTCTGTTTTTATCAACTTATCTTGCCGACGTCACCAAAAGATACTAT
T CAA TTT ATTT T TATT CATAAGCA T TC C ..GTC CTCT T T A CA C TCT G C T A C AT
Dp TACAACAGTTTAATTTATCTATTGCATAAGCAACTGTCGCATT--GTCACTCTATGTAGAGGCACCATCAAGTCTAGTCTCGCTTCTTGAGCATCCCAAT

1101
Dm CTCAACT---TGTATCTACACCTTTTTTTTGCATTTAAATTTAACTAACGGCCGAAAGTTTAGTTGCAACAACGTTTTGTGCACTTTCCGGTCTTAATTT
CT A ...T A T C T T TT GC T AAT T CT A G C T TG T T ACTT C GTC T T
Dp CTTGAGGCTGTCGACGTCACCACTGTCTTCGCCTGGGAATATTCCTCAGCGGCAGCGATGGGCATGGCGTGTGCGGCTCTCAACTTATCTGTCAAGTTGT

1201
Dm TTTGGAATT-------TTCTGATAAGATAACACTAAGCTATTTCAGATACGTAAATAATGTGGGTATTCGTGAAACTGAAAATTTCTATTTAATTAATAG
T A T .......TT TG AA A AA AC AA AT T A A GTA ATA T TT TG....TG A TTTC T T T
Dp CGTTAATTGGCGATCGTTTTGCCAAAACAAAACGAATGCATCTTATCGATGTACATATTTATACATTTACTG----TGTATTTTTCCGTCTGCGTGGGGC

1301
Dm ATATTGAGAAA----------ACATTCCCTTTAAGAAATGACAACACAGGCAGTAATCTTTAAGTCT-----------------------GAGTTTACGT
TATT AA..........AC T C TAAGA AT C C AG ATCTT AG .......................G G TTACGT
Dp GTATTAGCCAAGGGGTGCCGGACCCTGCTGATAAGATATAGCTCCTTGCTAAGGGATCTTCCAGAGAATCGCAAGAGCCTGTAGTTTAAAGCGCTTACGT

1401
Dm AATTTTTTTCGC------AAACGATTGTGAATTATCGTTGAATGACTAAAGCAAACAATAAGTTGATAGCTTTATTGACAACCCCGGCTTTCAACTCTGA
AATT TTTT GC......AAA TGAA TAT TT A TGA GCAAA AAT A T AT C .................TC T TG
Dp AATTATTTTAGCGAATTGAAATAGCGTTGAAATATTCTTAAGTGAAAGGTGCAAATAATGACTAAATGACGGA-----------------TCCGTTGTGC

1501
Dm AAATATTTTAATCTATAGATCCATTTTCTATATTTATTGCTTTGGGGATATATTTGACTTATTTTTCATGGAATATGATCCAATCCAATATGATATTTAT
AAA A T A T A T TCT A GCT GGG TT A A C TG AA G ....A CAA G T T
Dp AAAAACCTGATTTCGCAACGGTTTGGTCTCATCACAGCGCTGCGGGCGGCCCGTTCAAACAAACCCCTTGTAAACAGC----AATCAACTAGCTCTGATC

1601
Dm TTATCCCAATTTATATCTTGCAGCAACGTGCCGCAGCCGTTGGAGTGCAGCGCAGTTACCACATCACACACGGCCGCCAGCAGGCCTCGGCGGCGAATCC
ATC C T T T TCTT CAGCA CG GC GC GC TTG AG GCA CG AGTTA CACAT AC CACGG CGCCAGCAGGC CGGC GC AATCC
Dp CCATCTCTCTCTCTCTCTTTCAGCAGCGCGCAGCTGCAATTGCAGGGCAACGTAGTTATCACATAACGCACGGTCGCCAGCAGGCGACGGCAGCTAATCC

1701
Dm GGACAAGATATCGAAGCAGTACCCGGTGGTGGATCACGCCTACGATGCGATCGTCGTGGGAGCAGGAGGAGCCGGCTTGCGGGCGGCTTTTGGCCTGGTG
GGA AAGATATCGAAGCAGTA CC GT GT GATCA GCCTACGATGC T GT GTGGGAGC GG GG GC GG T CGGGC GCTTTTGGCCT GT
Dp GGATAAGATATCGAAGCAGTATCCTGTCGTCGATCATGCCTACGATGCAGTTGTGGTGGGAGCCGGCGGTGCTGGTCTCCGGGCCGCTTTTGGCCTTGTC

1801
Dm GCTGAGGGATTTCGCACGGCGGTGATCACCAAGCTTTTCCCCACCCGCTCGCACACGATCGCCGCCCAGGGCGGTATCAATGCCGCTCTCGGCAACATGG
GC GAGGGATT CGCACGGCGGTGATCACCAA T TTCCCCACCCGCTCGCACACGAT GCCGC CAGGGCGG ATCAATGC GC CT GGCAA ATGG
Dp GCCGAGGGATTCCGCACGGCGGTGATCACCAAATTGTTCCCCACCCGCTCGCACACGATTGCCGCGCAGGGCGGCATCAATGCGGCGCTGGGCAATATGG

1901
Dm AGGAGGACGACTGGAAGTGGCACATGTACGACACGGTCAAGGGCTCCGATTGGCTGGGCGACCAGGATGCCATCCACTACATGACCCGCGAGGCGCCCAA
AGGAGGACGACTGGAAGTGGCACATGTACGACAC GTCAAGGG TCCGA TGGCTGGGCGA CAGGATGCCAT CACTACATGACCCG GAGGC CCCAA
Dp AGGAGGACGACTGGAAGTGGCACATGTACGACACAGTCAAGGGATCCGACTGGCTGGGCGATCAGGATGCCATACACTACATGACCCGGGAGGCACCCAA

2001
Dm GGCTGTCATTGAGCTGGAGAACTACGGCATGCCCTTCTCGCGTACCCAGGACGGTAAGATCTACCAGCGCGCCTTCGGTGGACAGAGTCTGAAGTTCGGC
GGCTGTCAT GAGCTGGAGAACTACGGCATGCCCTTCTC CG AC CA GACGG AAGAT TACCAGCGCGCCTTCGGTGG CAGAG TGAA TTCGGC
Dp GGCTGTCATCGAGCTGGAGAACTACGGCATGCCCTTCTCCCGCACACAAGACGGAAAGATATACCAGCGCGCCTTCGGTGGCCAGAGCTTGAAATTCGGC

2101
Dm AAGGGCGGACAGGCCCATCGCTGCTGTGCTGTGGCTGATCGTACTGGTCACTCGCTGCTGCACACGCTATACGGTCAATCGCTGAGCTACGACTGCAACT
AAGGGCGGACAGGC CAT G TG TGTGCTGTGGC GATCGTAC GG CACTC CTG TGCACAC CT TACGG CA TCGCT AG TACGA TGCAACT
Dp AAGGGCGGACAGGCGCATAGATGTTGTGCTGTGGCGGATCGTACCGGGCACTCCCTGTTGCACACCCTCTACGGACAGTCGCTCAGTTACGATTGCAACT

2201
Dm ACTTTGTGGAGTACTTTGCCCTGGATCTGATCTTCGAGGACGGCGAGTGCCGTGGTGTGCTGGCCCTGAACCTGGAGGATGGCACACTGCACCGATTCCG
ACTTTGTGGAGTACTTTGCCCTGGATCTGATCTTCGAGGA GGCGAGTGCCG GG GTG TGGCCCT AACCTGGAGGATGG AC CTGCACCG TTCCG
Dp ACTTTGTGGAGTACTTTGCCCTGGATCTGATCTTCGAGGATGGCGAGTGCCGGGGCGTGTTGGCCCTTAACCTGGAGGATGGTACTCTGCACCGTTTCCG

2301
Dm CGCTAAGAACACGGTCATTGCCACCGGTGGATATGGACGAGCATTCTTCTCCTGCACCTCGGCGCACACATGTACCGGTGACGGTACTGCTATGGTTGCA
GC AGAACAC GTCATTGCCAC GG GG TATGG CG GC TT TTCTCCTGCACCTC GC CACAC TG AC GG GACGG ACTGCTATGGT GC
Dp AGCCCAGAACACCGTCATTGCCACTGGCGGCTATGGCCGTGCCTTTTTCTCCTGCACCTCTGCCCACACCTGCACTGGCGACGGCACTGCTATGGTCGCT

2401
Dm CGCCAGGGACTGCCCTCTCAGGATCTGGAGTTCGTGCAGTTCCATCCTACTGGCATCTACGGCGCCGGATGTCTCATCACCGAGGGCTGCCGCGGTGAGG
CG CAGGG CT CCCTCTCA GA TGGAGTT GT CAGTTCCA CC ACTGGCATCTA GG GCCGG TG CTCAT ACCGAGGGCTGCCGCGG GAGG
Dp CGACAGGGCCTCCCCTCTCAAGACTTGGAGTTTGTTCAGTTCCACCCCACTGGCATCTATGGAGCCGGCTGCCTCATTACCGAGGGCTGCCGCGGCGAGG

2501
Dm GTGGTTACCTGATCAACGGTAATGGTGAGCGCTTCATGGAGCGCTATGCTCCTGTGGCCAAGGATCTGGCCTCTCGCGACGTCGTCTCGCGGTCGATGAC
GTGG TACCTGATCAA G AA GG GA CG TTCATGGAGCG TATGCTCC GTGGC AAGGATCT GCCTCTCG GACGTCGT TCGCG TC ATGAC
Dp GTGGCTACCTGATCAATGCCAAGGGCGAACGTTTCATGGAGCGGTATGCTCCGGTGGCGAAGGATCTCGCCTCTCGGGACGTCGTGTCGCGTTCAATGAC

2601
Dm CATCGAGATCATGGAGGGTCGTGGCGCTGGACCCGAGAAGGATCACGTGTACCTGCAACTGCACCACTTGCCGCCCAAGCAGCTCGCGGAGCGTCTGCCT
CATCGAGATCATGGAGGGTCGTGG G TGG CCCGA AAGGATCACGT TACCTGCA CTGCACCA TTGCC CCCAAGCAGCT GC GAGCG CT CC
Dp CATCGAGATCATGGAGGGTCGTGGTGTTGGCCCCGACAAGGATCACGTTTACCTGCAGCTGCACCATTTGCCACCCAAGCAGCTGGCCGAGCGACTACCC

2701
Dm GGCATCTCCGAGACCGCCATGATCTTCGCCGGTGTTGATGTGACCCGTGAGCCCATCCCCGTGTTGCCCACCGTGCATTACAACATGGGCGGTGTGCCGA
GGCATCTC GAGAC GC ATGAT TT GCCGG GT GATGT AC CG GAGCC ATCCCCGT TT CCCAC GTGCA TACAACATGGG GGTGTGCC A
Dp GGCATCTCAGAGACAGCTATGATTTTTGCCGGCGTAGATGTAACACGCGAGCCAATCCCCGTCTTACCCACGGTGCACTACAACATGGGTGGTGTGCCAA

2801
Dm CTAACTATCGCGGCCAGGTAATCACCATTGACAAGGATGGCAAGGATGTGATTGTGCCGGGACTGTATGCCGCTGGTGAGGCTGCTTCCAGCTCGGTGCA
C AACTATCGCGGCCAGGT ATCACC TTGACAAGGA GGCAAGGAT T ATTGT CC GG CT TA GC GC GG GAGGC GC TCCAGCTC GT CA
Dp CCAACTATCGCGGCCAGGTGATCACCGTTGACAAGGACGGCAAGGATATCATTGTCCCCGGCCTCTACGCTGCAGGGGAGGCAGCCTCCAGCTCTGTTCA

2901
Dm TGGTGCCAACCGTCTGGGTGCCAACTCTCTGCTGGATCTGGTGGTCTTCGGACGTGCATGCGCCAAGACCATCGCCGAGCTGAATAAGCCTGGTGCACCG
GGTGCCAA CGTCTGGGTGCCAACTCTCTGCTGGATCTGGT GT TTCGGACGTGC TGCGCCAAGACCAT GCCGAG GAATAAGCC GG GC C
Dp CGGTGCCAATCGTCTGGGTGCCAACTCTCTGCTGGATCTGGTTGTTTTCGGACGTGCCTGCGCCAAGACCATTGCCGAGGAGAATAAGCCCGGCGCTGCT

3001
Dm GCTCCCACCCTCAAGGAAAACGCTGGCGAGGCCTCTGTTGCTAACCTCGATAAGCTGCGCCATGCCAACGGCCAGATCACCACCGCCGATCTGCGTCTGA
GCTCCCAC CTCAAGGA A GCTGGCGAGGCCTCTGT GCTAAC T GATAAGCTGCGC TGCCAACGGCCAGATCACCAC GCCGATCTGCG CTGA
Dp GCTCCCACTCTCAAGGATACAGCTGGCGAGGCCTCTGTGGCTAACTTGGATAAGCTGCGCTTTGCCAACGGCCAGATCACCACTGCCGATCTGCGCCTGA

3101
Dm AGATGCAGAAGACCATGCAGCATCATGCTGCTGTGTTCCGCGATGGCCCCATCCTGCAGGACGGTGTGAACAAGATGAAGGAGATCTACAAGCAGTTCAA
AGATGCAGAAGACCATGCAGCATCATGC GCTGTGTTCCGCGA GG CCCATCCT AGGA GGTGTGA CAA ATG AGGAGATCTACAAGCA TTCAA
Dp AGATGCAGAAGACCATGCAGCATCATGCCGCTGTGTTCCGCGACGGGCCCATCCTCAAGGAGGGTGTGAGCAAAATGCAGGAGATCTACAAGCAATTCAA

3201
Dm GGACATCAAGGTTGTCGATAGGTGAATATAAAAACAAGTATTTTTTTGATTCCCTCTAACATTCCTTGAC----TTTAAAGGTCGCTTATCTGGAACTCC
GGAC T AAGGTTGT GA A GTGA T AACA T TTTT G TT T A T TGA ....TTT AGGTC CT TCTGGAACTC
Dp GGACGTTAAGGTTGTGGACAAGTGAGTGCGCGAACATTTGAATTTTAGTTTGAGATTTATTTAATCTGAAATCATTTTTAGGTCCCTAGTCTGGAACTCG

3301
Dm GATCTGGTGGAGACGCTGGAGCTGCAGAATCTGTTGGCCAATGCCCAGATGACTATTGTGAGCGCTGAGGCGCGCAAGGAATCGCGAGGTGCCCACGCCC
GAT TGGT GAGACGCTGGAGCTGCAGAATCTGTTGGCCAATGCCCA ATGAC ATTGTG G GC GAGGCGCG AAGGA TCGCG GGTGC CACGCCC
Dp GATTTGGTCGAGACGCTGGAGCTGCAGAATCTGTTGGCCAATGCCCAAATGACCATTGTGGGAGCCGAGGCGCGTAAGGAGTCGCGTGGTGCTCACGCCC

3401
Dm GCGAGGACTTCAAGGTTCGCGAGGATGAATACGTAAGTTACTGTCGGCACTCAGCC---CCTGAACTTCTTATCATGGAACAACATGTATTGCAGGATTT
G GA GACTTCAAG T G GA GAATA GTAAGTT T T GG C CA ...CC G ACT T T AT G A T TTGCAGGATT
Dp GTGAAGACTTCAAGATCAGGCTTGACGAATATGTAAGTTGATTTGGGGCCACAAGAAAGCCGGCACTGGCTTTTATTGTATGTTTCTTCTTGCAGGATTA

3501
Dm CAGCAAGCCCCTGGATGGTCAGCAGAAGAAGCCCATGGATCAGCACTGGCGCAAGCACACGCTCTCGTGGGTGTGCAATGACAACGGAGACATTACGCTG
CAGCAAGCCC T GA GG CAG AGAAG GCCC T GA AGCACTGGCGCAAGCACACGCTC C TGGGTGTGCAA GACAA GGAGA TT G TG
Dp CAGCAAGCCCGTCGAGGGACAGGAGAAGGTGCCCTTTGAGAAGCACTGGCGCAAGCACACGCTCGCCTGGGTGTGCAACGACAATGGAGATGTTCAGTTG

3601
Dm GACTACAGAAACGTGATCGATACCACGCTGGACAACGAAGTCTCTACTGTTCCACCAGCGATTCGCTCCTATTAAATCAAGACTTGGAGTTGCAGAACAC
GA TACAG AACGT ATCGATACCACGCTGGACAACGA GT TC AC GT CC CCAGCGAT CGCTCCTA TAAAT A A AG TG AG AC
Dp GATTACAGGAACGTAATCGATACCACGCTGGACAACGAGGTGTCAACGGTGCCGCCAGCGATCCGCTCCTACTAAATTGATATGATTAGATGGAGGCTAC

3701
Dm CCGCATATACACCCCATACCAT-------------CACTCGTACGGATGTCTACTTAAACGTCTTTGTGGGCGCCAGTAAATAAATTTTGTCAAATCGCC
CCGCATA ACA A ACCA .............CAC C ACGGATGTCTACTTAA........G GG CGC A A AA A AT
Dp CCGCATACACATAAAACACCACAGCCAACACACACCACACACACGGATGTCTACTTAA--------GGGGTCGCAACCTGAGGAAAGGAAAGATATTTAG

3801
Dm AAATGAGCCGCAATATGCTACCAATTGGTAACTGGGAACTCGGCAGCGGTTCCGGGCATTTTGTGATGAAACGTAAATCCAGATTTTCTATAC-------
A GAG CGCAA T C ATT ...C GG AACT GCA C.....C C T TTG GA AA GTAAA CCAG T T C ATA .......
Dp AGTCGAGTCGCAAATTTTGTACTATTTC---CGGGAAACTTTGCACC-----CCAACGTCTTGCGACAGAATGTAAAGCCAGTTATCCCATATGCATCCT

3901
Dm ACCTATAAATCTTTCAAATCCTTATTACTACTCCGCTGATTCTACTTAGTTTCACTGTAAGCTGC-----------CCTCCATTTGGTTACTGTTTGGTT
AC TATA AT TT AT T TA C CTG TTCTA TA TTTC T CTG ...........CC CC TG TTACT TTT
Dp ACATATATATATTCTCTATATATTCTATGTTGCTCCTGTTTCTATCTATTTTCTGTACGCCCTGTATGCCCTCCCTCCACCTGATGATTACTTTTTTTCG

4001
Dm GTCGGTTATTTACATT-----ATTACATAAGCGAAAAATGTGTGTGAGTAGACAAC-GAGTTAGGTCTGAGGCGATATTGAC-----------------T
GT G TTAT TACA T.....ATT A A G AAAATGTGTGTGA AC.GAG A G TG G CGATA AC.................T
Dp GTTGTTTATATACAATTTACAATTTTACATTAGCAAAATGTGTGTGATGGCTTTACTGAGAGACGATTGCGACGATAAGAACAGAACGAAGCTTTGCTGT

4101
Dm ACGCAGCCTGTTTAGAAGCAAATGAAAACAAA--TCCAACTACACTTTTCTAGTATTTGTTAAACTTATTAAATTATTAAAACGAAAACGTGTAAAAACA
C GCCT A AAGCAAA GAAAA AAA..TCCAAC A TTTTCTAGTATTTGTTAAACTTATTAAATTATT AAAC AAAA TGTAAAAA
Dp GCTTTGCCTAGCAATAAGCAAAAGAAAAAAAAAATCCAACAAACATTTTCTAGTATTTGTTAAACTTATTAAATTATTGAAACAAAAAAATGTAAAAATC

4201
Dm ATAAAAAAAGAACAAAAGTCGAAACGTTTGCTATACATTAAATAAATGTAATGAAGATTAAGTGCGCAA
A AAAAAAA .CAAAA GAA TTTGCT TA A AAATAAA AATGAA AT A T G
Dp ACAAAAAAACC-CAAAATCTGAACTATTTGCTGTATAGCAAATAAAGTGAATGAAAATGAGTTTTGGTC