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COMPLEX I - 75 kDa subunit
COMPLEX I
13kDa-A   13kDa-B
15kDa
  18kDa
19kDa
  20kDa
23kDa   24kDa
30kDa
  39kDa
42kDa
  49kDa
51kDa   75kDa
ACP
  B8   B12
B14   B14.5a
B14.5b   B15
B16.6
  B17   B17.2
B18   B22   ASHI
MLRQ   MNLL
PDSW   SGDH

COMPLEX II

FP  
Fe-S
CYTb560
CYTb560 small


COMPLEX III
6.4kDa   7.2kDa
11kDa   14kDa
CYTC1   CP1   CP2
Fe-S
  UQ-B.QP-C

COMPLEX IV
IV   Va   Vb   VIa
VIb
  VIc   VIIa   VIIc

COMPLEX V
alpha   beta
gamma
  delta
epsilon
   b   d   e
f
  g   OSCP
Cf6
  LBP

Peptide alignment
Identity = 91.0%     Similarity = 95.0%
   1
Dm MIRAPLVKALGALGSPTHQMASRAVRTSAMVAQTPAKAPEKIEVFVDDIPVQVVPGTTVLQAAAQIGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVA
Dp MIRAPLVKALGALGSPTHQIASRAVRTSAIVAQTPAKAPEKIEVFVDDIPVQVLPGTTVLQAAALVGVEIPRFCYHERLAVAGNCRMCLVEVEKSPKPVA

101
Dm ACAMPVMKGWRIKTNSDLTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDRSRFTDINYTGKRAVEDKDIGPLVKTIMTRCIHCTRCVRFA
Dp ACAMPVMKGWRIKTNSDLTRKAREGVMEFLLMNHPLDCPICDQGGECDLQDQAMAFGSDRSRFTDINYTGKRAVEDKDIGPLVKTIMTRCIHCTRCVRFA

201
Dm SEIAGVDDLGTTGRGNDMQIGTYVEKLFLTELSGNVIDLCPVGALTNKPYSFVARPWEIRKVSSIDVLDAVGSNIVVSTRTNEVLRILPRENEDVNEEWL
Dp SEIAGVDDLGTTGRGNDMQIGTYVEKLFLSELSGNVIDLCPVGALTNKPYSFVARPWEIRKVSSIDVLDAVGSNIVVSTRTNEVLRILPRENEDVNEEWL

301
Dm ADKSRFACDGLKRQRLVAPMVRMPNGELQAVEWEGALIAVAKAIKAAGGQIAGISGQLADLEAQVALKDLLNRLGSEVVATEQGFIAG-GTDNRANYLLN
Dp ADKSRFACDGLKRQRLVAPMVRMPNGELQAVEWEGALIAVAKALKKANGQVAGVAGQLADVEAMVALKDLVNRLEGETLVTEQGFIKGSGTDVRANYLLN

401
Dm STIAGLEEADAVLLVGTNPRYEAPLVNTRLRKAYVHNELQIASIGPKIDLSYDHENLGADAALVKDVCSGAHAFSKVLEGAKKPAIIIGADLLERADGAA
Dp STIAGLEEADAVLLVGTNPRYEAPLVNTRLRKAYVHNESQIASIGPKIDLSYEHDNLGSDPVLIKDVCSGSHAFSKVLEGAKKPAIIIGADLLEREDGAA

501
Dm IHATVAEYCKKLKKPNWNPFNVLQTNAAQVGALDVGYKAGAQTAVKAQPKVLFLLNADAGKVTREQLPKDCFVVYIGSHGDNGASIADAVLPGAAYTEKQ
Dp IHATIVEYCQKLKKPEWNPFNVLQNNAAQVGAYDVGYQPGADRAVKAQPKVLFLLNADAGKVTREQLPKDCFVVYIGSHGDNGASIADAVLPGAAYTEKQ

601
Dm GIYVNTEGRPQQTLPGVSPPGMAREDWKILRALSEVVGKPLPYDNLDELRNRLEDVAPHLTRLGQLEPAG--DAGAAGTISKSIGGGAIDIKLKELRDYF
Dp AIYVNTEGRPQQTLPGVSPPGMAREDWKILRAISEVVGTPLPYDTLDELRARLEDISPHLTRLGELESAGFNDTGAQAAISKSIGGGAIDVKQKELRDYF

701
Dm MTDAISRASPTMAKCISAVNKQQRENE-AKQSVAI
Dp MTDAISRSSLTMAKCILAVNKQKRQDEQAKQSVAI
DNA alignment
Colour code:   UTRs    -   Coding   -   Intron(s)   -   NRG element(s)   -   Unknown
   1
Dm GACCAGCTGTCAACGCGGCAGTTGGCAACGCGGTCGGTCTGTCAAAGCAAAATCCGATAAAAAAAAAGTTGTCTCCACATTAAAAGATCACAGGAATATT
G CAGCTGTCAA GCAGTTGGCAACGCGG G C A AAAAAAGTTGTCTCC CAT A A TCA A AATATT
Dp GGTCAGCTGTCAAACGTGCAGTTGGCAACGCGGCAGTCACAGTTCGACTGTCAAAAGCGATAAAAAAGTTGTCTCCGCATCGAGAATTCAAATAAATATT

101
Dm TTCCAGCATTTCGGTAGGTCTTCGCCCACTTTTGGCATCCTCCAGGATCCCCATTCAGGTGGCAAATGGCGGTGCAGTGGAGGAGCTGA-CTCCGAAAAC
TTCCAGCATTTCGGTAGGT TT C A T T..............TCC CA CA G GC T G T C GTG AG A.C CC AC
Dp TTCCAGCATTTCGGTAGGTTTTGCTCGATCTGT--------------TCCGCAGCCACGCAGCTCCTCGAATTCCCGTGAAGTTTTACATCCCCCGGTAC

201
Dm GCACACGAATCGCGAACAATCGATATGCGGG----------AGTGTTGTGCCAACCAGCGTACCAAAACACTTATGTAATTTTTATTGGCTCCTCCGATT
ACA AT GAA AA G TA GG..........A GTTG C A GC CA ACTTATGTAATT TTA ......GA
Dp ATACAATTATGAGGAAAAACAGTTACAGCGGGCACAAATCGATAGTTGACCAATGTTGCCAGGCAGCTTACTTATGTAATTGTTAGGAAA------GAGG

301
Dm GCAACGGATTTTTGGTTACCATCTCGTTGCAGAAAATATGATACGGGCACCGCTAGTCAAGGCGCTGGGCGCTCTGGGCTCGCCCACACATCAGATGGCC
C G TTTT G T C TCTCGTTGCAGAAAATATGATACG GCACCGCT GTCAAGGCGCTGGGCGC CTGGGCTC CCCACACATCAGAT GCC
Dp ATTGCAGTTTTTGTGGTTGCTTCTCGTTGCAGAAAATATGATACGTGCACCGCTTGTCAAGGCGCTGGGCGCACTGGGCTCACCCACACATCAGATCGCC

401
Dm AGCCGGGCGGTGCGAACCAGCGCCATGGTGGCCCAGACACCGGCGAAAGCGCCCGAGAAGATCGAGGTCTTTGTGGATGACATTCCCGTGCAGGTGGTAC
AGCCG GCGGTGCG ACCAGCGCCAT GTGGCCCAGACACCGGC AA GCGCCCGAGAA ATCGAGGTCTTTGTGGATGA ATTCCCGTGCAGGTG T C
Dp AGCCGAGCGGTGCGCACCAGCGCCATCGTGGCCCAGACACCGGCCAAGGCGCCCGAGAAAATCGAGGTCTTTGTGGATGATATTCCCGTGCAGGTGCTGC

501
Dm CCGGCACCACTGTCCTCCAGGTTGGTTTCCAGTCCCTCGTTCGCGGGAAGTGCCTTCTAAACCCATATCCCCTATGCCCTGCAAATCCTAGGCTGCTGCT
C GG ACCAC GT CT CAGGT GT T G C .TCGT C G AGTG A C T CC T CCC C C..AGGCTGC GC
Dp CTGGGACCACAGTGCTGCAGGTGAGTGTGTTGGCA-TCGTAATCCGACAGTGATCATCCATCATTTCCATCCATTCCCCGTCTGGGC--AGGCTGCAGCC

601
Dm CAGATCGGCGTGGAGATACCCAGATTCTGCTACCACGAACGTCTTGCGGTGGCCGGCAACTGCAGGATGTGCCTCGTCGAGGTGGAGAAGAGTCCCAAGC
C G TCGGCGT GAGAT CC G TTCTGCTA CA GA CG CT GC GTGGCCGG AACTGC G ATGTGC T GT GAGGTGGAGAAGAGTCCCAAGC
Dp CTGGTCGGCGTTGAGATTCCGCGCTTCTGCTATCATGAGCGCCTAGCTGTGGCCGGAAACTGCCGCATGTGCTTGGTGGAGGTGGAGAAGAGTCCCAAGC

701
Dm CAGTGGCCGCCTGCGCTATGCCCGTGATGAAGGGCTGGCGCATCAAGACCAACTCGGATTTGACCCGCAAGGCGCGCGAGGGCGTCATGGAGTTCCTGCT
C GTGGCCGCCTGCGC ATGCCCGT ATGAAGGGCTGGCGCATCAAGACCAACTCGGAT TGAC CGCAAGGC CGCGA GGCGTCATGGAGTTCCTGCT
Dp CGGTGGCCGCCTGCGCCATGCCCGTCATGAAGGGCTGGCGCATCAAGACCAACTCGGATCTGACGCGCAAGGCTCGCGAAGGCGTCATGGAGTTCCTGCT

801
Dm GATGAACCATCCGCTGGATTGCCCCATCTGCGATCAGGGCGGCGAGTGCGATCTGCAGGATCAGGCCATGGCCTTCGGTTCCGATCGATCCCGCTTCACG
GATGAACCATCC TGGA TG CCCAT TGCGA CAGGG GGCGAGTGCGATCT CAGGATCAGGC ATGGCCTT GG TCCGATCGATCCCGCTTCACG
Dp GATGAACCATCCTTTGGACTGTCCCATTTGCGACCAGGGGGGCGAGTGCGATCTTCAGGATCAGGCTATGGCCTTTGGCTCCGATCGATCCCGCTTCACG

901
Dm GACATTAACTACACGGGCAAGCGGTAAGGAGAATAATCCATAAAGTTCCTTTTCCATAACCTGAACTGAATTCTACCTAATG------CGTTAACAGCGC
GACAT AACTACAC GGCAAGCGGTAAG T C .........C TTTC A C CTGA T C CCT AT ......CG CAGCGC
Dp GACATAAACTACACCGGCAAGCGGTAAGAGTTCTGCGCT---------CCTTTCAAATCCTCCTGCTGATTGCATCCTTATTTTCTGTCGAGTGCAGCGC

1001
Dm TGTCGAGGACAAGGACATCGGACCGCTAGTCAAGACCATCATGACACGCTGCATCCACTGCACCCGCTGTGTGCGTTTCGCCTCCGAGATTGCCGGCGTT
GT GAGGACAAGGA AT GG CCGCT GT AAGACCATCATGAC CGCTGCATCCACTGCACC G TG GT CG TTCGCCTC GA ATTGCCGGCGT
Dp CGTGGAGGACAAGGATATTGGGCCGCTGGTGAAGACCATCATGACCCGCTGCATCCACTGCACCAGATGCGTTCGCTTCGCCTCAGAAATTGCCGGCGTG

1101
Dm GATGACCTGGGCACCACTGGCCGTGGCAACGACATGCAGATCGGCACCTACGTGGAGAAGCTCTTCCTTACCGAACTGTCCGGCAACGTGATCGACCTGT
GA GA TGGGCACCAC GG CG GGCAACGACATGCAGATCGG ACCTACGTGGAGAAGCTCTTCCT C GA CT TCCGG AACGTGAT GAC TGT
Dp GACGATTTGGGCACCACCGGACGCGGCAACGACATGCAGATCGGTACCTACGTGGAGAAGCTCTTCCTCTCAGAGCTCTCCGGGAACGTGATTGACTTGT

1201
Dm GCCCCGTGGGAGCGCTGACCAACAAGCCCTACAGTTTTGTGGCCCGTCCCTGGGAGATCCGTAAGGTGAGCAGCATCGATGTGCTGGACGCCGTCGGCAG
GCCCCGT GG GC CT ACCAACAAGCCCTA AG TTTGTGGCCCG CCCTGGGAGATCCG AAGGTGAGCAGCATCGATGT CTGGACGCCGT GGCAG
Dp GCCCCGTAGGTGCCCTCACCAACAAGCCCTATAGCTTTGTGGCCCGCCCCTGGGAGATCCGCAAGGTGAGCAGCATCGATGTCCTGGACGCCGTTGGCAG

1301
Dm CAACATTGTCGTCAGCACCCGCACCAATGAGGTGCTGCGCATCCTGCCCCGTGAGAACGAGGACGTCAACGAGGAATGGCTTGCTGACAAATCGCGCTTC
CAACAT GTCGT AGCACCCGCACCAA GAGGTGCTGCGCATCCTGCCCCG GAGAACGA GACGTCAACGAGGA TGG T GC GACAA TC CGCTTC
Dp CAACATCGTCGTTAGCACCCGCACCAACGAGGTGCTGCGCATCCTGCCCCGCGAGAACGAAGACGTCAACGAGGAGTGGTTAGCGGACAAGTCCCGCTTC

1401
Dm GCCTGCGACGGTCTGAAGCGCCAGCGCCTGGTGGCTCCCATGGTGCGCATGCCCAACGGCGAACTACAGGCCGTAGAGTGGGAGGGTGCCCTCATCGCCG
GC TGCGACGG CT AAGCGCCAGCGC T GT GC CCCATGGTGCGCATGCCCAACGGCGA CT CAGGCCGT GAGTGGGAGGG GC CTCAT GC G
Dp GCTTGCGACGGACTCAAGCGCCAGCGCTTAGTCGCCCCCATGGTGCGCATGCCCAACGGCGAGCTGCAGGCCGTGGAGTGGGAGGGAGCGCTCATTGCGG

1501
Dm TGGCCAAGGCCATTAAGGCAGCCGGTGGACAGATTGCCGGTATTTCTGGCCAACTTGCCGACCTGGAGGCTCAGGTGGCCCTGAAGGATCTGCTGAACCG
GGCCAAGGCC T AAG GCC TGGACA T GCCGG TT C GG CA CT GCCGAC T GAGGC GGTGGC CT AAGGATCTG T AA CG
Dp TGGCCAAGGCCCTCAAGAAGGCCAATGGACAAGTGGCCGGCGTTGCGGGACAGCTGGCCGACGTTGAGGCCATGGTGGCGCTCAAGGATCTGGTCAATCG

1601
Dm TCTGGGCAGCGAAGTGGTCGCCACTGAACAAGGATTTATTGCCGGA---GGCACCGACAACCGTGCTAATTACCTCTTGAACAGCACCATTGCCGGTTTG
CTGG GCGA G TCG CAC GA CA GG TT AT GG ...GG ACCGA CG GC AATTA T T AACAGCACCATTGCCGG TG
Dp CCTGGAGGGCGAGACGCTCGTCACCGAGCAGGGGTTCATCAAGGGCTCCGGTACCGATGTGCGAGCCAATTATTTGCTCAACAGCACCATTGCCGGCCTG

1701
Dm GAGGAGGCCGACGCCGTTCTCCTGGTGGGCACCAATCCCCGTTACGAGGCTCCATTGGTCAACACCCGTTTGCGCAAGGCCTATGTGCACAACGAACTGC
GAGGAGGCCGA GCCGTTCTC TGGT GGCAC AATCCCCG TACGAGGCTCC TGGTCAACAC CG TGCGCAAGGCCTATGT CA AACGA GC
Dp GAGGAGGCCGATGCCGTTCTCTTGGTCGGCACTAATCCCCGCTACGAGGCTCCCCTGGTCAACACGCGGCTGCGCAAGGCCTATGTCCATAACGAGTCGC

1801
Dm AGATTGCCTCGATTGGACCCAAGATCGATCTGTCCTACGACCACGAGAACCTTGGCGCCGATGCCGCTTTAGTCAAGGACGTGTGCTCCGGAGCTCATGC
AGATTGCCTC ATTGG CCCAAGATCGATCTGTC TACGA CACGA AACCT GG CCGAT C G T TCAAGGACGT TGCTC GG CTCA GC
Dp AGATTGCCTCCATTGGTCCCAAGATCGATCTGTCGTACGAACACGACAACCTCGGTTCCGATCCTGTCCTCATCAAGGACGTCTGCTCTGGCTCTCACGC

1901
Dm CTTCTCCAAGGTCTTGGAGGGTGCCAAGAAGCCGGCCATCATTATTGGAGCCGATTTGTTGGAGCGTGCCGATGGTGCCGCCATTCACGCCACCGTTGCC
CTTCTCCAAGGT T GAGGG GCCAAGAAGCC GCCAT AT ATTGG GCCGAT T TGGAGCG G GATGGTGCCGCCAT CA GCCACC T G
Dp CTTCTCCAAGGTGCTCGAGGGCGCCAAGAAGCCAGCCATTATCATTGGTGCCGATCTCCTGGAGCGCGAAGATGGTGCCGCCATCCATGCCACCATCGTG

2001
Dm GAGTACTGCAAGAAGCTGAAGAAGCCGGTAAGTTTGTCATCCCTTTGCTCACATGAATTCCTGC--TTAATCTCATGCTTCGCTTACAGAACTGGAACCC
GAGTA TGC AGAAGCT AAGAAGCC GT AGT TC TC CTC C TG ATT T C..TTA T TGC C TT CAG A TGGAACCC
Dp GAGTATTGCCAGAAGCTCAAGAAGCCAGTGAGTCGCTCTTCATGCATCTCTCTTGTATTATTACGATTATTGCTTTGCCGCAATTGCAGGAGTGGAACCC

2101
Dm CTTCAATGTGCTGCAGACCAACGCCGCCCAGGTGGGCGCCCTCGATGTGGGCTACAAGGCCGGTGCACAGACCGCTGTGAAGGCTCAGCCCAAGGTGCTG
CTTCAA GT TGCAGA AA GCCGCCCAGGTGGG GCC CGATGTGGG TAC AG C GG GCA A CGC GT AAGGC CAGCCCAAGGTGCTG
Dp CTTCAACGTCTTGCAGAATAATGCCGCCCAGGTGGGAGCCTACGATGTGGGTTACCAGCCGGGAGCAGATCGCGCCGTCAAGGCCCAGCCCAAGGTGCTG

2201
Dm TTCCTGTTGAACGCCGACGCTGGCAAGGTGACTCGCGAGCAGCTGCCCAAGGACTGCTTCGTGGTGTACATTGGATCGCATGGTGACAACGGCGCCTCCA
TTCCTG TGAA GCCGA GC GGCAAGGTGAC CGCGAGCAGCT CCCAAGGACTGCTT GTGGTGTACATTGGATCGCATGG GACAA GG GCCTCCA
Dp TTCCTGCTGAATGCCGATGCCGGCAAGGTGACCCGCGAGCAGCTACCCAAGGACTGCTTTGTGGTGTACATTGGATCGCATGGCGACAATGGAGCCTCCA

2301
Dm TTGCCGATGCCGTTCTGCCTGGTGCCGCCTACACAGAGAAGCAGGGCATCTACGTGAACACGGAGGGCAGGCCGCAGCAGACGCTGCCTGGTGTTTCGCC
TTGCCGA GC GT CTGCCTGGTGCCGCCTACAC GAGAAGCAGG ATCTACGTGAACACGGAGGGCAG CC CAGCAGAC TGCC GG GT TCGCC
Dp TTGCCGACGCTGTGCTGCCTGGTGCCGCCTACACGGAGAAGCAGGCTATCTACGTGAACACGGAGGGCAGACCCCAGCAGACATTGCCGGGCGTGTCGCC

2401
Dm ACCGGGTATGGCTCGCGAGGACTGGAAGATCCTGCGCGCTCTGTCCGAGGTGGTGGGCAAGCCGCTGCCGTACGACAACCTGGACGAGCTGCGCAACCGT
CCGGG ATGGC CGCGAGGACTGGAAGAT CTGCG GC T TC GAGGTGGTGGGCA CCGCTGCC TACGACA CT GACGAGCTGCGC CG
Dp GCCGGGCATGGCCCGCGAGGACTGGAAGATACTGCGTGCCATCTCTGAGGTGGTGGGCACCCCGCTGCCCTACGACACACTCGACGAGCTGCGCGCTCGC

2501
Dm CTGGAGGATGTGGCGCCACATCTAACGCGCCTGGGCCAATTGGAGCCAGCCGGC------GATGCCGGAGCAGCGGGCACTATTGTAAGTTGAAATTATG
CT GA GAT T CGCCACATCT ACGCGCCT GG A TGGAG CAGC GGC......GA CCGG GC GG C AT GT AGT GA T G
Dp CTTGAAGATATTTCGCCACATCTGACGCGCCTCGGAGAGCTGGAGTCAGCTGGCTTCAATGACACCGGTGCCCAGGCTGCCATCGTGAGTAGACCCTGGG

2601
Dm CTCCATTGAAAGTTGTAA---TTTATTACTGTTTGTTTGTTTGCAGAGCAAATCCATCGGCGGTGGCGCCATCGATATTAAGCTAAAGGAGCTGCGCGAC
T A T T ...TT AC T T TTTGCAGAGCAAATCCATCGGCGG GG GCCATCGAT T AAGC AAGGAGCTGCGCGAC
Dp TCTTTATCTATTCTCTGTGCCTTATGCACGACCTTTCCTTTTGCAGAGCAAATCCATCGGCGGCGGAGCCATCGATGTGAAGCAGAAGGAGCTGCGCGAC

2701
Dm TACTTCATGACCGACGCCATTTCGCGCGCCTCGCCCACCATGGCCAAGTGCATATCGGCGGTCAACAAGCAGCAGCGGGAGAACGAG---GCCAAGCAGA
TACTTCATGACCGA GCCATTTC CGC CCTC C CACCATGGCCAAGTGCATAT GGCGGTCAACAAGCA AGCGG AG ACGAG...GCCAAGCAGA
Dp TACTTCATGACCGATGCCATTTCACGCTCCTCCCTCACCATGGCCAAGTGCATATTGGCGGTCAACAAGCAAAAGCGGCAGGACGAGCAGGCCAAGCAGA

2801
Dm GTGTGGCTATCTAGGCGCCCACTCTCGCGTCTGA-TCTAAACTAATAACTAATTAATGTTTTTTTTTAAACTCTGCCCTTCGTCCTTTCGCGCCGCACTC
G GTGGC ATCTAG C CC C C T T A.T A TAAT A T T AT T TTTTTTT AACT TGC ..............CCGC C C
Dp GCGTGGCCATCTAGACCTCCTACCCCTGATATAACTACTTATTAATTAATGCTCTATATATTTTTTTTAACTTTGCTT--------------CCGCCCCC

2901
Dm GCCCACTAATTAACGGACACAAAGACACCAGGACGAGCCGCGGGAAGAGCCAGCGCAGTAGCGGGATGAGGAGCACGATCGGCGGCTGCAGAGGCGCCAG
G C CT A AAC GA...A AG CA CAGGA GAG CGC G A GAG A CGC G.........................G T A GC G
Dp GTCTCCTTAAGAACAGA---ACAGTCAGCAGGAGGAGTCGCAGCAGGAGTAATCGCCG-------------------------GCATAGAACAGCCTTGG

3001
Dm CGCTGCGTCAGTTGTAAATGAAAAAGTCTTACGTTGTTCAAAACAAAGGAGTTATTCAATAC-------------GAAAAATAGGAAAACCAAAATAAAA
CG GC AG T AA T T A GTTGTTCAAAAC AA A A T AATA .............GAAAA G AAAACCAAAATAAA
Dp CGGAGCTCTAGGCATTGTGAAATGTCTTTCAAGTTGTTCAAAACGAAACAAAAAATAAATAATTATACAATACGTGAAAATAGGAAAAACCAAAATAAAC

3101
Dm ATGTAATAG
A AATAG
Dp AACAAATAG