Core protein 1

COMPLEX I 13kDa-A 13kDa-B 15kDa 18kDa 19kDa 20kDa 23kDa 24kDa 30kDa 39kDa 42kDa 49kDa 51kDa 75kDa ACP B8 B12 B14 B14.5a B14.5b B15 B16.6 B17 B17.2 B18 B22 ASHI MLRQ MNLL PDSW SGDH COMPLEX II FP Fe-S CYTb560 CYTb560 small COMPLEX III 6.4kDa 7.2kDa 11kDa 14kDa CYTC1 CP1 CP2 Fe-S UQ-B.QP-C COMPLEX IV IV Va Vb VIa VIb VIc VIIa VIIc COMPLEX V alpha beta gamma delta epsilon b d e f g OSCP Cf6 LBP	Peptide alignment
Identity = 94.7% Similarity = 97.7%
1 Dm MALRVLGVTQNMRSFMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVAHFLEHMAFKGTAKRSQT Dp MALRVLGVTQNMRSFLRGVDLIKRSKSTATLQKTLLNIPATHVTKLDNGLRVASEDSGAATATVGLWIDAGSRSENERNNGVAHFLEHMAFKGTAKRSQT 101 Dm DLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKN Dp DLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLEEEKIARERSVILREMQEIESNLQEVVFDHLHATAYQGTPLGQTILGPTKN 201 Dm IQSIGKADLTDYIQTHYKASRIVLAAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTDQDNIPLMVANTL Dp IQSIGKSDLTDYIQTHYKASRIVLAAAGGVKHEDLVQLAGSSLGRLEASTLPPEITPCRFTGSEVRVRDDSLPLAHVAVAVEGCGWTDQDNIPLMVANTL 301 Dm VGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPIC Dp VGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQCEDMIFNIQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPIC 401 Dm EDIGRQILCYNRRIPLHELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYWLRV Dp EDIGRQILCYNRRIPLHELEQRINNVSVSNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYWLRV
DNA alignment
Colour code: UTRs - Coding - Intron(s) - NRG element(s) - Unknown
1 Dm CTGATTAGGTCGGCCAATATTTTCGTGTTAGCTATCCAAATTAGGTGTTTATTTCAATAGCAAGCCGGAAAACCAGGAAAAACGAAAAAATTGTGTTGCC TGA TAG G C AT TTT CGT T T T A A...........C ATA CCG AAC A AA AAAAA TT Dp TTGAATAGAAAGTACTATTTTTCCGTTTACAATCTAAATTCAA-----------CTATATGTTTCCGAGCAACAAACGCTAAAACAAAAAGAAAATTCGA 101 Dm GTTTCAGCCAGTGTGTGCACACCAGGGCT--------ATTTTCCACGAACAGCTGACTGGCCGCAGCCAACTTTGCGCAGCGCA---------GTACATT TTT CA GTGT A A C G GC ........AT C C AACAGCTG G CGCAGCCAACTT C CA C .........GT A T Dp TTTTATTACATAGTGTTGAAAACCGCGCATTGGATTCATCCAGCCCTAACAGCTGTTCGAGCGCAGCCAACTTATCCCACCCTGTGAATGAGTGTGAAGT 201 Dm GGTGTGTGTGTGTGA-ATTTTTCATCAGCGCCGCGGCCACAGACGAAAAAGTCTTAAATATTTTTTAGTAATAGGCTATTGAACGAATTAATAAAACGAT GTGTGTGTGTG G .A TTTTCA CAGCGCCG G CA.........AA TTAA TA TTTT AGT A ATT AACGA AA AAACGAT Dp CGTGTGTGTGTGCGTGAATTTTCAACAGCGCCGAAGGCA---------AACGTTTAAGTAATTTTAAGTTAATAAGAATTAAACGATAGAAACAAACGAT 301 Dm GGCGTTGCGAGTTCTTGGCGTGACGCAGAATATGCGCTCCTTCATGCGGGGCGTTGACATGATCAAAGTAAGTCCAGACAGCCATCCAATGATTACGCTT GGCGTTGCG GTTCTTGG GT ACGCAGAATATGCGCTC TTC TGCG GGCGTTGAC T ATCAA GTAAGTC C G ......TGATTACGCT Dp GGCGTTGCGTGTTCTTGGAGTAACGCAGAATATGCGCTCATTCTTGCGAGGCGTTGACCTCATCAAGGTAAGTCTCACCCGTT------TGATTACGCTG 401 Dm CCGAGGATTTAAATTACGTAATTGTAAATG------ATTGTGTTTTTGGTTGCAATTGTGGTTTATTCTTGTGAGAAAAGGGATAAACAACCTCTTGTTG C AGGAT AAATTACGTAATT AA G......A TG TTTT A TG G T T T T GGGA A C A TC...... Dp ACCAGGATACAAATTACGTAATTTGAATGGGCATAAACTGCACTTTTTCCGAGCAGTGCGCGCTCTCTTCCTCCCGGTCGGGACTACCGATGTC------ 501 Dm GTCAGTTATTCAAGAGCCATCCAGTTTTTCAAACAAATATTTGGGAAAACTGTTTGGAAAACCCACTACAAGCACTTTGAGGTTATGTTCGTGTTTTACT ..CAG A TCA AGCC CCAGTTT C A A TT G AA A T T G AAA A.A G A TTTGAGGTTATG T TG TTTACT Dp --CAGCCAGTCAGCAGCCCACCAGTTTAATGCGCGGAAAATTCGCAACATTTCTGTGGAAAATGTTGA-ATGGATTTTGAGGTTATGGTTATGATTTACT 601 Dm TAACTCTGGGCTATAGTTTTCCCAATTTTCCCGAACTTACAGCGATACAAGTCGGCTGCCACCCTACAGAAGACTCTGCTGAACATACCCGCCACCCAGG TAACT ......AT TTT C TT CCGA C ACAGCG T AAGTCG CTGCCACCCT CAGAAGACTCTGCTGAACATACCCGCCACCCA G Dp TAACTA------ATCTTTTGCGTCGCTTATCCGATCCCACAGCGCTCTAAGTCGACTGCCACCCTGCAGAAGACTCTGCTGAACATACCCGCCACCCACG 701 Dm TGACCAAGCTGGACAACGGTCTCCGCGTGGCTAGCGAGGATTCCGGTGCCTCTACCGCCACCGTGGGACTGTGGATCGATGCTGGGTCGCGCTCCGAGAA TGACCAAGCTGGACAA GGTCT CGCGT GCTAGCGAGGATTC GG GC C ACCGCCACCGT GG CT TGGATCGATGCTGG TC CG TCCGAGAA Dp TGACCAAGCTGGACAATGGTCTGCGCGTCGCTAGCGAGGATTCTGGCGCAGCCACCGCCACCGTCGGTCTCTGGATCGATGCTGGTTCCCGTTCCGAGAA 801 Dm CGAGAAGAACAACGGAGTGGCCCACTTCCTGGAGCACATGGCCTTCAAGGTTGGCTCACTAGCTTGATGCTTTAAATGCGTATAATATGCGTTTCTGCCA CGAGA GAACAACGG GTGGCCCACTTCCTGGAGCACATGGCCTTCAAGGT G C A T GC TT ..GC TA TAT T C Dp CGAGAGGAACAACGGCGTGGCCCACTTCCTGGAGCACATGGCCTTCAAGGTGAGTGGTCGATAATTCCGCATTCC--GCATAGTTTATAAAACATTACGT 901 Dm CTTTTTAGGGTACCGCCAAGCGCTCGCAAACGGATTTGGAGCTGGAGGTTGAGAACCTGGGCGCCCACTTGAACGCCTACACTTCCAGGGAGCAGACCGT CTTTTTAGGG ACCGCCAAGCGCTC CA AC GA TGGAGCTGGAGGTTGAGAACCTGGGCGCCCA TGAA GCCTACAC TC G GAGCAGACCGT Dp CTTTTTAGGGCACCGCCAAGCGCTCCCAGACCGACCTGGAGCTGGAGGTTGAGAACCTGGGCGCCCATCTGAATGCCTACACGTCTCGCGAGCAGACCGT 1001 Dm CTTCTACGCCAAGTGTTTGTCCAAGGATGTGCCCAAAGCCGTCGAGATCCTGGCCGACATCATCCAGAACTCCAAGCTGGGTGAGGCTGAGATCGCCCGC CTTCTACGCCAAGTG TTGTC AAGGA GT CC AA GCCGT GA AT CTGGCCGACAT ATCCA AACTCCAAGCTGG GAGG AGAT GCCCGC Dp CTTCTACGCCAAGTGCTTGTCTAAGGACGTACCGAAGGCCGTTGAAATTCTGGCCGACATTATCCAAAACTCCAAGCTGGAAGAGGAGAAGATTGCCCGC 1101 Dm GAGCGTTCGGTGATTCTGCGCGAGATGCAGGAGGTGGAGAGCAACCTGCAGGAGGTGGTCTTCGATCACCTTCACGCCACCGCCTATCAGGGCACTCCTC GAGCGTTCGGT AT CTGCGCGAGATGCA GAG T GAGAGCAACCT CAGGAGGTGGT TTCGATCAC T CA GCCACCGCCTA CAGGGCAC CC Dp GAGCGTTCGGTCATCCTGCGCGAGATGCAAGAGATTGAGAGCAACCTCCAGGAGGTGGTGTTCGATCACTTGCATGCCACCGCCTACCAGGGCACCCCGT 1201 Dm TGGGCCAGACCATCCTGGGACCCACCAAGAACATTCAGTACGTATATTCAGCTCTTAT--AACAAATGCTCTGTCTCTAATTAAAATCTTCATTTATTTA TGGG CAGACCATCCT GG CCCACCAAGAACATTCAGT CGTAT A T ..AAC TG C C C T A T TTT A Dp TGGGTCAGACCATCCTTGGCCCCACCAAGAACATTCAGTGCGTATTACAAAAATATGACAAACTCTTGGGCATCCCCGGCTCATTGCTTGTTTTTGCGCA 1301 Dm GGTCCATTGGCAAGGCCGATCTGACCGACTACATCCAGACCCACTACAAGGCTTCGCGCATCGTTCTGGCCGCTGCTGGCGGCGTCAAGCACGATGATCT GGTCCATTGGCAA CCGA TGACCGACTACATCCAGACCCACTACAAGGC TC CGCAT GT CTGGCCGC GC GGCGG GT AAGCA GA GAT T Dp GGTCCATTGGCAAATCCGACTTGACCGACTACATCCAGACCCACTACAAGGCCTCTCGCATTGTCCTGGCCGCCGCCGGCGGTGTGAAGCATGAGGATTT 1401 Dm GGTCAAGCTTGCCTGCAGCAGCTTGGGTGGCCTGGAGGCCAGTGTGCTGCCCGCGGAGGTGACTCCCTGCCGCTTCACCGGCTCCGAGGTGCGTGTGCGC GGTC A CT GCC GC AGC TGGG GCCTGGAGGC AG GCTGCC C GAG T ACTCCCTGCCG TTCACCGGCTC GAGGT CGTGTGCGC Dp GGTCCAACTGGCCGGCTCGAGCCTGGGCCGCCTGGAGGCTAGCACGCTGCCACCAGAGATCACTCCCTGCCGTTTCACCGGCTCTGAGGTCCGTGTGCGC 1501 Dm GACGATTCCCTGCCCCTGGCCCATGTCGCCATCGCCGTCGAAGGCTGCGGCTGGACCGACCAGGACAACATCCCCCTGATGGTGGCCAACACCTTGGTGG GACGATTCCCT CCCCT GCCCATGT GC TCGCCGT GA GG TGCGGCTGGACCGA CAGGACAACATCCC TGATGGTGGCCAACACCTTGGTGG Dp GACGATTCCCTTCCCCTAGCCCATGTGGCTGTCGCCGTTGAGGGTTGCGGCTGGACCGATCAGGACAACATCCCATTGATGGTGGCCAACACCTTGGTGG 1601 Dm GTGCTTGGGATCGTTCCCAAGGCGGTGGCGCCAACAACGCCTCCAACCTGGCCCGTGCCAGCGCTGAGGACAGTAAGTGTACATCAGTAAGACGACCAGG GTGC TGGGATCG TC CA GGCGGTGG GCCAACAA GCCTCCAACCTGGCCCGTGCCAGCGC GAGGACAGT AGT TA A A C Dp GTGCCTGGGATCGCTCTCAGGGCGGTGGAGCCAACAATGCCTCCAACCTGGCCCGTGCCAGCGCCGAGGACAGTGAGTATATAAATCAGTAGTAATCCCA 1701 Dm ATATGGAGATTATTAACTATTA---TTGCCCTACAGACCTTTGCCACAGCTTCCAATCGTTCAACACATGCTACAAGGACACCGGACTCTGGGGCATTTA GAG T A A T T A...T CC ACAGACCT TGCCACAGCTTCCA TCGTTCAACAC TGCTACAAGGACACCGG CT TGGGGCATTTA Dp GATACGAGTTCACCCAGTCTGACGCTCCACCCACAGACCTGTGCCACAGCTTCCAGTCGTTCAACACCTGCTACAAGGACACCGGTCTTTGGGGCATTTA 1801 Dm CTTCGTGTGCGACCCTCTGCAGTGCGAGGTAAGAAGAATTAATGATTCAACAGAAAACTCTCGAGAGAAAGCAAATTTTACGTAAACAAACCTCTTCCCC CTTCGTGTGCGA CCTCTGCAGTG GAGGTAA A AT TC ........CTC C A A A T TA A A C C T C Dp CTTCGTGTGCGATCCTCTGCAGTGTGAGGTAAAGCATAGATATTCATCC--------CTCCCTAAAACCACTCGGATATAACAATGAGATTCGCATTGGC 1901 Dm AGGATATGCTCTTCAACGTGCAGACCGAGTGGATGCGTCTGTGCACCATGGTTACCGAGGCTGAGGTCGAGCGCGCCAAGAACCTTCTGAAGACCAACAT AGGA ATG TCTTCAAC T CAGAC GAGTGGATGCGTCT TGCACCATGGT ACCGAGGC GAGGT GAGCGCGCCAAGAAC T CTGAAGACCAACAT Dp AGGACATGATCTTCAACATTCAGACGGAGTGGATGCGTCTCTGCACCATGGTCACCGAGGCCGAGGTGGAGCGCGCCAAGAACTTGCTGAAGACCAACAT 2001 Dm GCTGCTGCAGCTCGACGGCACCACACCCATCTGCGAGGACATTGGCCGCCAGATCCTGTGCTACAACCGCCGCATCCCGCTGCACGAGCTGGAGCAGCGC GCTGCTGCAGCT GACGG ACCAC CCCATCTGCGAGGACATTGGCCGCCAGAT CTGTGCTACAACCGCCGCATCCC TGCACGAGCTGGAGCAGCGC Dp GCTGCTGCAGCTGGACGGAACCACCCCCATCTGCGAGGACATTGGCCGCCAGATTCTGTGCTACAACCGCCGCATCCCATTGCACGAGCTGGAGCAGCGC 2101 Dm ATCGATGCCGTGAGTGTGGGCAATGTGCGCGACGTCGCAATGAAGTACATCTACGATCGGTGCCCAGCCGTCGCTGCCGTGGGTCCCGTTGAGAACCTGC ATC A GT AGTGTG AATGTGCGCGA GT GC ATGAAGTA ATCTACGA G TGCCC GCCGTCGC GC GTGGG CCCGT GAGAACCTGC Dp ATCAACAATGTCAGTGTGTCGAATGTGCGCGATGTGGCCATGAAGTATATCTACGACAGATGCCCTGCCGTCGCCGCTGTGGGACCCGTCGAGAACCTGC 2201 Dm CCGACTACAACAGAATCCGCTCCTCCATGTACTGGTTGAGGGTTTAAGAG------------------GTTCCGCCCCGCTGTTGTTGGACATTGTAGTT CCGACTACAACAGAAT CGCTCCTCCATGTACTGGTTGAGGGT TAAG G..................GT CCGC CC CTGTTGTTG ACAT G Dp CCGACTACAACAGAATTCGCTCCTCCATGTACTGGTTGAGGGTCTAAGTGATCGCGCTAGGCGTTCCCGTCCCGCTCCCCTGTTGTTGAACATGTACGAG 2301 Dm TAATTCAA---AAGAAAATTTCACCCCCAGAGGATCAGTAAACCGATAA-TACTAAAAGTT TA TT AA...AAGAAAATTTCA C A AG.ATCAGTAAACCGA AA.TAC A A TT Dp TAGTTTAATCCAAGAAAATTTCATGCAAAAAG-ATCAGTAAACCGAAAAATACCTACAATT

COMPLEX I
13kDa-A 13kDa-B
15kDa 18kDa
19kDa 20kDa
23kDa 24kDa
30kDa 39kDa
42kDa 49kDa
51kDa 75kDa
ACP B8 B12
B14 B14.5a
B14.5b B15
B16.6 B17 B17.2
B18 B22 ASHI
MLRQ MNLL
PDSW SGDH

COMPLEX II
FP Fe-S
CYTb560
CYTb560 small

COMPLEX III
6.4kDa 7.2kDa
11kDa 14kDa
CYTC1 CP1 CP2
Fe-S UQ-B.QP-C

COMPLEX IV
IV Va Vb VIa
VIb VIc VIIa VIIc

COMPLEX V
alpha beta
gamma delta
epsilon b d e
f g OSCP
Cf6 LBP

Peptide alignment

Identity = 94.7% Similarity = 97.7%

   1
Dm MALRVLGVTQNMRSFMRGVDMIKRYKSAATLQKTLLNIPATQVTKLDNGLRVASEDSGASTATVGLWIDAGSRSENEKNNGVAHFLEHMAFKGTAKRSQT
Dp MALRVLGVTQNMRSFLRGVDLIKRSKSTATLQKTLLNIPATHVTKLDNGLRVASEDSGAATATVGLWIDAGSRSENERNNGVAHFLEHMAFKGTAKRSQT
 
   101
Dm DLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLGEAEIARERSVILREMQEVESNLQEVVFDHLHATAYQGTPLGQTILGPTKN
Dp DLELEVENLGAHLNAYTSREQTVFYAKCLSKDVPKAVEILADIIQNSKLEEEKIARERSVILREMQEIESNLQEVVFDHLHATAYQGTPLGQTILGPTKN
 
   201
Dm IQSIGKADLTDYIQTHYKASRIVLAAAGGVKHDDLVKLACSSLGGLEASVLPAEVTPCRFTGSEVRVRDDSLPLAHVAIAVEGCGWTDQDNIPLMVANTL
Dp IQSIGKSDLTDYIQTHYKASRIVLAAAGGVKHEDLVQLAGSSLGRLEASTLPPEITPCRFTGSEVRVRDDSLPLAHVAVAVEGCGWTDQDNIPLMVANTL
 
   301
Dm VGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQCEDMLFNVQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPIC
Dp VGAWDRSQGGGANNASNLARASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQCEDMIFNIQTEWMRLCTMVTEAEVERAKNLLKTNMLLQLDGTTPIC
 
   401
Dm EDIGRQILCYNRRIPLHELEQRIDAVSVGNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYWLRV
Dp EDIGRQILCYNRRIPLHELEQRINNVSVSNVRDVAMKYIYDRCPAVAAVGPVENLPDYNRIRSSMYWLRV

DNA alignment

Colour code: UTRs - Coding - Intron(s) - NRG element(s) - Unknown

   1
Dm CTGATTAGGTCGGCCAATATTTTCGTGTTAGCTATCCAAATTAGGTGTTTATTTCAATAGCAAGCCGGAAAACCAGGAAAAACGAAAAAATTGTGTTGCC
    TGA TAG   G  C AT TTT CGT T    T T  A    A...........C ATA     CCG   AAC A     AA   AAAAA     TT   
Dp TTGAATAGAAAGTACTATTTTTCCGTTTACAATCTAAATTCAA-----------CTATATGTTTCCGAGCAACAAACGCTAAAACAAAAAGAAAATTCGA
 
   101
Dm GTTTCAGCCAGTGTGTGCACACCAGGGCT--------ATTTTCCACGAACAGCTGACTGGCCGCAGCCAACTTTGCGCAGCGCA---------GTACATT
    TTT    CA  GTGT  A A C G GC ........AT    C C AACAGCTG   G  CGCAGCCAACTT  C CA C   .........GT  A T
Dp TTTTATTACATAGTGTTGAAAACCGCGCATTGGATTCATCCAGCCCTAACAGCTGTTCGAGCGCAGCCAACTTATCCCACCCTGTGAATGAGTGTGAAGT
 
   201
Dm GGTGTGTGTGTGTGA-ATTTTTCATCAGCGCCGCGGCCACAGACGAAAAAGTCTTAAATATTTTTTAGTAATAGGCTATTGAACGAATTAATAAAACGAT
    GTGTGTGTGTG G .A TTTTCA CAGCGCCG  G CA.........AA   TTAA TA TTTT AGT A      ATT AACGA   AA  AAACGAT
Dp CGTGTGTGTGTGCGTGAATTTTCAACAGCGCCGAAGGCA---------AACGTTTAAGTAATTTTAAGTTAATAAGAATTAAACGATAGAAACAAACGAT
 
   301
Dm GGCGTTGCGAGTTCTTGGCGTGACGCAGAATATGCGCTCCTTCATGCGGGGCGTTGACATGATCAAAGTAAGTCCAGACAGCCATCCAATGATTACGCTT
   GGCGTTGCG GTTCTTGG GT ACGCAGAATATGCGCTC TTC TGCG GGCGTTGAC T ATCAA GTAAGTC    C G  ......TGATTACGCT 
Dp GGCGTTGCGTGTTCTTGGAGTAACGCAGAATATGCGCTCATTCTTGCGAGGCGTTGACCTCATCAAGGTAAGTCTCACCCGTT------TGATTACGCTG
 
   401
Dm CCGAGGATTTAAATTACGTAATTGTAAATG------ATTGTGTTTTTGGTTGCAATTGTGGTTTATTCTTGTGAGAAAAGGGATAAACAACCTCTTGTTG
    C AGGAT  AAATTACGTAATT  AA  G......A TG   TTTT       A TG G   T T  T  T       GGGA  A C A  TC......
Dp ACCAGGATACAAATTACGTAATTTGAATGGGCATAAACTGCACTTTTTCCGAGCAGTGCGCGCTCTCTTCCTCCCGGTCGGGACTACCGATGTC------
 
   501
Dm GTCAGTTATTCAAGAGCCATCCAGTTTTTCAAACAAATATTTGGGAAAACTGTTTGGAAAACCCACTACAAGCACTTTGAGGTTATGTTCGTGTTTTACT
   ..CAG  A TCA  AGCC  CCAGTTT      C  A A TT G AA A T  T  G AAA      A.A G A TTTGAGGTTATG T  TG TTTACT
Dp --CAGCCAGTCAGCAGCCCACCAGTTTAATGCGCGGAAAATTCGCAACATTTCTGTGGAAAATGTTGA-ATGGATTTTGAGGTTATGGTTATGATTTACT
 
   601
Dm TAACTCTGGGCTATAGTTTTCCCAATTTTCCCGAACTTACAGCGATACAAGTCGGCTGCCACCCTACAGAAGACTCTGCTGAACATACCCGCCACCCAGG
   TAACT ......AT  TTT C     TT  CCGA C  ACAGCG T  AAGTCG CTGCCACCCT CAGAAGACTCTGCTGAACATACCCGCCACCCA G
Dp TAACTA------ATCTTTTGCGTCGCTTATCCGATCCCACAGCGCTCTAAGTCGACTGCCACCCTGCAGAAGACTCTGCTGAACATACCCGCCACCCACG
 
   701
Dm TGACCAAGCTGGACAACGGTCTCCGCGTGGCTAGCGAGGATTCCGGTGCCTCTACCGCCACCGTGGGACTGTGGATCGATGCTGGGTCGCGCTCCGAGAA
   TGACCAAGCTGGACAA GGTCT CGCGT GCTAGCGAGGATTC GG GC  C ACCGCCACCGT GG CT TGGATCGATGCTGG TC CG TCCGAGAA
Dp TGACCAAGCTGGACAATGGTCTGCGCGTCGCTAGCGAGGATTCTGGCGCAGCCACCGCCACCGTCGGTCTCTGGATCGATGCTGGTTCCCGTTCCGAGAA
 
   801
Dm CGAGAAGAACAACGGAGTGGCCCACTTCCTGGAGCACATGGCCTTCAAGGTTGGCTCACTAGCTTGATGCTTTAAATGCGTATAATATGCGTTTCTGCCA
   CGAGA GAACAACGG GTGGCCCACTTCCTGGAGCACATGGCCTTCAAGGT  G    C A   T   GC TT  ..GC TA   TAT       T C  
Dp CGAGAGGAACAACGGCGTGGCCCACTTCCTGGAGCACATGGCCTTCAAGGTGAGTGGTCGATAATTCCGCATTCC--GCATAGTTTATAAAACATTACGT
 
   901
Dm CTTTTTAGGGTACCGCCAAGCGCTCGCAAACGGATTTGGAGCTGGAGGTTGAGAACCTGGGCGCCCACTTGAACGCCTACACTTCCAGGGAGCAGACCGT
   CTTTTTAGGG ACCGCCAAGCGCTC CA AC GA  TGGAGCTGGAGGTTGAGAACCTGGGCGCCCA  TGAA GCCTACAC TC  G GAGCAGACCGT
Dp CTTTTTAGGGCACCGCCAAGCGCTCCCAGACCGACCTGGAGCTGGAGGTTGAGAACCTGGGCGCCCATCTGAATGCCTACACGTCTCGCGAGCAGACCGT
 
   1001
Dm CTTCTACGCCAAGTGTTTGTCCAAGGATGTGCCCAAAGCCGTCGAGATCCTGGCCGACATCATCCAGAACTCCAAGCTGGGTGAGGCTGAGATCGCCCGC
   CTTCTACGCCAAGTG TTGTC AAGGA GT CC AA GCCGT GA AT CTGGCCGACAT ATCCA AACTCCAAGCTGG  GAGG   AGAT GCCCGC
Dp CTTCTACGCCAAGTGCTTGTCTAAGGACGTACCGAAGGCCGTTGAAATTCTGGCCGACATTATCCAAAACTCCAAGCTGGAAGAGGAGAAGATTGCCCGC
 
   1101
Dm GAGCGTTCGGTGATTCTGCGCGAGATGCAGGAGGTGGAGAGCAACCTGCAGGAGGTGGTCTTCGATCACCTTCACGCCACCGCCTATCAGGGCACTCCTC
   GAGCGTTCGGT AT CTGCGCGAGATGCA GAG T GAGAGCAACCT CAGGAGGTGGT TTCGATCAC T CA GCCACCGCCTA CAGGGCAC CC  
Dp GAGCGTTCGGTCATCCTGCGCGAGATGCAAGAGATTGAGAGCAACCTCCAGGAGGTGGTGTTCGATCACTTGCATGCCACCGCCTACCAGGGCACCCCGT
 
   1201
Dm TGGGCCAGACCATCCTGGGACCCACCAAGAACATTCAGTACGTATATTCAGCTCTTAT--AACAAATGCTCTGTCTCTAATTAAAATCTTCATTTATTTA
   TGGG CAGACCATCCT GG CCCACCAAGAACATTCAGT CGTAT    A     T  ..AAC   TG  C   C C   T A     T   TTT    A
Dp TGGGTCAGACCATCCTTGGCCCCACCAAGAACATTCAGTGCGTATTACAAAAATATGACAAACTCTTGGGCATCCCCGGCTCATTGCTTGTTTTTGCGCA
 
   1301
Dm GGTCCATTGGCAAGGCCGATCTGACCGACTACATCCAGACCCACTACAAGGCTTCGCGCATCGTTCTGGCCGCTGCTGGCGGCGTCAAGCACGATGATCT
   GGTCCATTGGCAA  CCGA  TGACCGACTACATCCAGACCCACTACAAGGC TC CGCAT GT CTGGCCGC GC GGCGG GT AAGCA GA GAT T
Dp GGTCCATTGGCAAATCCGACTTGACCGACTACATCCAGACCCACTACAAGGCCTCTCGCATTGTCCTGGCCGCCGCCGGCGGTGTGAAGCATGAGGATTT
 
   1401
Dm GGTCAAGCTTGCCTGCAGCAGCTTGGGTGGCCTGGAGGCCAGTGTGCTGCCCGCGGAGGTGACTCCCTGCCGCTTCACCGGCTCCGAGGTGCGTGTGCGC
   GGTC A CT GCC GC   AGC TGGG  GCCTGGAGGC AG   GCTGCC  C GAG T ACTCCCTGCCG TTCACCGGCTC GAGGT CGTGTGCGC
Dp GGTCCAACTGGCCGGCTCGAGCCTGGGCCGCCTGGAGGCTAGCACGCTGCCACCAGAGATCACTCCCTGCCGTTTCACCGGCTCTGAGGTCCGTGTGCGC
 
   1501
Dm GACGATTCCCTGCCCCTGGCCCATGTCGCCATCGCCGTCGAAGGCTGCGGCTGGACCGACCAGGACAACATCCCCCTGATGGTGGCCAACACCTTGGTGG
   GACGATTCCCT CCCCT GCCCATGT GC  TCGCCGT GA GG TGCGGCTGGACCGA CAGGACAACATCCC  TGATGGTGGCCAACACCTTGGTGG
Dp GACGATTCCCTTCCCCTAGCCCATGTGGCTGTCGCCGTTGAGGGTTGCGGCTGGACCGATCAGGACAACATCCCATTGATGGTGGCCAACACCTTGGTGG
 
   1601
Dm GTGCTTGGGATCGTTCCCAAGGCGGTGGCGCCAACAACGCCTCCAACCTGGCCCGTGCCAGCGCTGAGGACAGTAAGTGTACATCAGTAAGACGACCAGG
   GTGC TGGGATCG TC CA GGCGGTGG GCCAACAA GCCTCCAACCTGGCCCGTGCCAGCGC GAGGACAGT AGT TA A           A C   
Dp GTGCCTGGGATCGCTCTCAGGGCGGTGGAGCCAACAATGCCTCCAACCTGGCCCGTGCCAGCGCCGAGGACAGTGAGTATATAAATCAGTAGTAATCCCA
 
   1701
Dm ATATGGAGATTATTAACTATTA---TTGCCCTACAGACCTTTGCCACAGCTTCCAATCGTTCAACACATGCTACAAGGACACCGGACTCTGGGGCATTTA
        GAG T A   A T T A...T   CC ACAGACCT TGCCACAGCTTCCA TCGTTCAACAC TGCTACAAGGACACCGG CT TGGGGCATTTA
Dp GATACGAGTTCACCCAGTCTGACGCTCCACCCACAGACCTGTGCCACAGCTTCCAGTCGTTCAACACCTGCTACAAGGACACCGGTCTTTGGGGCATTTA
 
   1801
Dm CTTCGTGTGCGACCCTCTGCAGTGCGAGGTAAGAAGAATTAATGATTCAACAGAAAACTCTCGAGAGAAAGCAAATTTTACGTAAACAAACCTCTTCCCC
   CTTCGTGTGCGA CCTCTGCAGTG GAGGTAA     A   AT   TC ........CTC C A A   A      T TA   A    A  C C T   C
Dp CTTCGTGTGCGATCCTCTGCAGTGTGAGGTAAAGCATAGATATTCATCC--------CTCCCTAAAACCACTCGGATATAACAATGAGATTCGCATTGGC
 
   1901
Dm AGGATATGCTCTTCAACGTGCAGACCGAGTGGATGCGTCTGTGCACCATGGTTACCGAGGCTGAGGTCGAGCGCGCCAAGAACCTTCTGAAGACCAACAT
   AGGA ATG TCTTCAAC T CAGAC GAGTGGATGCGTCT TGCACCATGGT ACCGAGGC GAGGT GAGCGCGCCAAGAAC T CTGAAGACCAACAT
Dp AGGACATGATCTTCAACATTCAGACGGAGTGGATGCGTCTCTGCACCATGGTCACCGAGGCCGAGGTGGAGCGCGCCAAGAACTTGCTGAAGACCAACAT
 
   2001
Dm GCTGCTGCAGCTCGACGGCACCACACCCATCTGCGAGGACATTGGCCGCCAGATCCTGTGCTACAACCGCCGCATCCCGCTGCACGAGCTGGAGCAGCGC
   GCTGCTGCAGCT GACGG ACCAC CCCATCTGCGAGGACATTGGCCGCCAGAT CTGTGCTACAACCGCCGCATCCC  TGCACGAGCTGGAGCAGCGC 
Dp GCTGCTGCAGCTGGACGGAACCACCCCCATCTGCGAGGACATTGGCCGCCAGATTCTGTGCTACAACCGCCGCATCCCATTGCACGAGCTGGAGCAGCGC
 
   2101
Dm ATCGATGCCGTGAGTGTGGGCAATGTGCGCGACGTCGCAATGAAGTACATCTACGATCGGTGCCCAGCCGTCGCTGCCGTGGGTCCCGTTGAGAACCTGC
   ATC A    GT AGTGTG   AATGTGCGCGA GT GC ATGAAGTA ATCTACGA  G TGCCC GCCGTCGC GC GTGGG CCCGT GAGAACCTGC
Dp ATCAACAATGTCAGTGTGTCGAATGTGCGCGATGTGGCCATGAAGTATATCTACGACAGATGCCCTGCCGTCGCCGCTGTGGGACCCGTCGAGAACCTGC
 
   2201
Dm CCGACTACAACAGAATCCGCTCCTCCATGTACTGGTTGAGGGTTTAAGAG------------------GTTCCGCCCCGCTGTTGTTGGACATTGTAGTT
   CCGACTACAACAGAAT CGCTCCTCCATGTACTGGTTGAGGGT TAAG G..................GT CCGC CC CTGTTGTTG ACAT    G  
Dp CCGACTACAACAGAATTCGCTCCTCCATGTACTGGTTGAGGGTCTAAGTGATCGCGCTAGGCGTTCCCGTCCCGCTCCCCTGTTGTTGAACATGTACGAG
 
   2301
Dm TAATTCAA---AAGAAAATTTCACCCCCAGAGGATCAGTAAACCGATAA-TACTAAAAGTT
   TA TT AA...AAGAAAATTTCA  C  A AG.ATCAGTAAACCGA AA.TAC  A A TT
Dp TAGTTTAATCCAAGAAAATTTCATGCAAAAAG-ATCAGTAAACCGAAAAATACCTACAATT