Core protein 2

COMPLEX I 13kDa-A 13kDa-B 15kDa 18kDa 19kDa 20kDa 23kDa 24kDa 30kDa 39kDa 42kDa 49kDa 51kDa 75kDa ACP B8 B12 B14 B14.5a B14.5b B15 B16.6 B17 B17.2 B18 B22 ASHI MLRQ MNLL PDSW SGDH COMPLEX II FP Fe-S CYTb560 CYTb560 small COMPLEX III 6.4kDa 7.2kDa 11kDa 14kDa CYTC1 CP1 CP2 Fe-S UQ-B.QP-C COMPLEX IV IV Va Vb VIa VIb VIc VIIa VIIc COMPLEX V alpha beta gamma delta epsilon b d e f g OSCP Cf6 LBP	Peptide alignment
Identity = 83.2% Similarity = 91.6%
1 Dm MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQV Dp MACNANKTHLLRAIAKRGYATCPRPVGDISAVSVNVLENKLVVATADATVPVSRVSIVLGAGSRNEAYDTLGASHLLRLAGGLSTQNSSAFAIARNIQQV 101 Dm GGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQPAFKPWELVDNAKTVVNQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYV Dp GGTLTTWGDREVVGYTVETTADNVETGLRYLQDLLQPAFKPWELKDNAKTLHNQLDAVTREQRAIELVHKAAFRTGLGNSIYIPRFQLGNLSTESLLHYV 201 Dm AQTFAAGRAAVVGVGIDNNTLAGFAQTLQFPSGGSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGE Dp ANTFSASRAAVVGVGIDNNTLSGFAQTLEFPSGGGKTASANYFGGDARKDTTGQRATVAVAGLGGSIANPKEALAFAVLEQAVGAGAATKRGNSSGLFGE 301 Dm AVNCAGGVG-ASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALL Dp AANSAGGSRPSSVRALNTSYSDAGLFGFVVSSEAKDIGKTVEFLVRGLKSGSVSEKDVARGKALLKARIISKYSSDGGLIKEIGRQAALSRNVLEADTLI 401 Dm GAIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDLA Dp AAIDGITQQQVQEAAKKVAGSKLSVGAIGNLENVPYASDLA
DNA alignment
Colour code: UTRs - Coding - Intron(s) - NRG element(s) - Unknown
1 Dm CTGTATGAATGTAACTGCCAAGGAAAAACATTTGTTAAATTTTTTCACTTAGTCAAATTATTCAAGATCACGATATTTCGAAAATCCCGTGACTTACCAT TATG GT A .....G A A AT TTAAA TT CA TT GT A ATTATT A.AT ATA T A A C T A T C AT Dp AGCTATGCCCGTGATCT-----GGAGATGATAGTTTAAACCTTAACAGTTTGTAATATTATTTTA-ATATGCATAAATAAAGTAACATTTAATCTCCTAT 101 Dm AAGTCACAGCTGGTACTCGGTGTGACCATTTTGGAGCGCATTGAAAAACTAGGGCTTAGTTGAACCCCGTGCGACGGCCACACTAGCGCGAACGACCG-- T ...GCT CG TGA C TT GA G TTGA A C A G TG C G..A CACA G GCGAACGA G.. Dp GCTTG---GCTCAGTTCCGAAATGAACCAGTTCGATTGTTTTGATAGTCGATAGGGCGAGTGGCGAACTAG--ATCTTCACAGCGGAGCGAACGATAGCG 201 Dm ---TAAAAATTTTCGCTCTGCGAATATTTGTAAA---AAATTGCTTAGAAAGCAAATAGAAGAAATTGTAGCATAATCCACGCCATGGCCTGTAACGCTA ...TAAAAATTTTCGCTCTGCGA T TTT T AA...AAA TGCTT AAA CA A AA A T GTA ATAAT ACGC ATGGCCTG AACGC A Dp GAGTAAAAATTTTCGCTCTGCGATTTTTTTTTAACAAAAACTGCTTTAAAATCAGACGAAAAAGTTAGTAATATAATTAACGCAATGGCCTGCAACGCAA 301 Dm GCAAGACGTCGCTCCTGCGCGCCATCGCCGTAAGTCTCGACTTAACCAACAAATAGTTACGGCAGCGATTCTTCCCAGCGGAAGGCTCGTGTTACGTAAA AAGACG CTC TGCGCGC ATCGC GTAAGT TC ACTTAACCAA AAA ..TTAC GC TTCC GG AG CTCGTGTTACGTAAA Dp ATAAGACGCATCTCTTGCGCGCTATCGCTGTAAGTTTCAACTTAACCAATAAAA--TTACAGCCAAATAATTTCCACTGGGGAGACTCGTGTTACGTAAA 401 Dm ACACCCCAAG---TTGCCATCTAAACAATGTCGAATGTAAGAAGAATTATAACAATTCCATAATGGTTTTCGGCAGAAACGAGGCTACGCCACCTGCCCG A A ...TT C T TAAACAAT GAA G......GA T AT A AAT A TG TTTC CAGAAACG GGCTA GCCACCTGCCC Dp AGATATAGTTGCTTTTCTGTTTAAACAATTATGAAAG------GACTAATGAAAATGTTACCCTGTCTTTCCTCAGAAACGGGGCTATGCCACCTGCCCA 501 Dm CGTCCCGTCGGCGACCTGTCCGCCGTGAACGTCAAGGTGCTGGAGAACAAACTGGTGGTAGCCACCGCCGATGCAACTCTTCCCGTTTCGCGCGTCTCTT CG CCCGT GGCGAC T TCCGCCGT A GT AA GT CT GAGAACAAA TGGT GT GCCAC GC GATGC AC TTCCCGT TCGCG GT TC Dp CGCCCCGTTGGCGACATCTCCGCCGTCAGTGTGAATGTTCTCGAGAACAAATTGGTTGTGGCCACAGCTGATGCCACCGTTCCCGTCTCGCGAGTGTCGA 601 Dm TGGTGCTGGGGTAAGTCAACGGAGCAGTAGACAATCG--CTTGGCGTATCCTAATCGACCAA---------------TTGCAGAGCCGGATCACGAAACG T GT TGGGGT AGT A G C CG..C TG C T TA T A CA ...............TTGCAGAGC GG TC CG AACG Dp TCGTCTTGGGGTGAGTGGCGACACAGTCTGCCTGCCGGCCCTGCCCAGTGTTATTGCATCACCGTTAATCTGGTTTCTTGCAGAGCTGGTTCCCGTAACG 701 Dm AGTCCTACGACATCCAGGGAGCCTCGCACCTGCTTCGTTTGGCCGGAGGACTGAGCACCCAGAACTCGACCGCCTTCGCCATCGCCCGCAACATCCAGCA AG CCTACGA A CC GGGAGC TC CA CTGCT CG TTGGCCGGAGGA TGAGCACCCAGAACTCG C GC TTCGCCAT GCCCGCAACAT CAGCA Dp AGGCCTACGATACCCTGGGAGCTTCCCATCTGCTCCGCTTGGCCGGAGGATTGAGCACCCAGAACTCGTCTGCTTTCGCCATTGCCCGCAACATTCAGCA 801 Dm GGTGGGCGGTACCCTGACCACATGGGGCGATCGCGAGCTCGTCGGCTACACGGTGACCACCACAGCAGACAACGCCGAGACTGGACTGCGCTATCTGCAG GGT GGCGG ACC TGACCAC TGGGGCGATCGCGAG T GTCGGCTACAC GTG ACCACAGC GACAA G GAGAC GG CTGCGCTA CTGCAG Dp GGTCGGCGGCACCTTGACCACCTGGGGCGATCGCGAGGTTGTCGGCTACACCGTGGAGACCACAGCCGACAATGTGGAGACCGGTCTGCGCTACCTGCAG 901 Dm GACCTGCTCCAGCCAGCCTTCAAGCCCTGGGAGTTGGTCGACAATGCCAAAACGGTGGTCAACCAACTGAACGCCGTCTCCACGGAGGTGAGCTCACATG GA CTGCT CAGCCAGCCTTCAAGCC TGGGAGTTG GA AATGC AA AC TG CAACCAACTG A GC GTC CC GAGGT AGC...CAT Dp GATCTGCTGCAGCCAGCCTTCAAGCCATGGGAGTTGAAGGATAATGCGAAGACTCTGCACAACCAACTGGATGCTGTCACCCGAGAGGTAAGC---CATT 1001 Dm CCATTAATCATGGATATAGCTGAGTCCTAGCTCCTTAATATAAATGCAACCAAATATTCCTGAATAACTCTTTGTTTTGTCTTTTGCAGGAACGCGCCAT C T A TC TG TA......TCCT T CTTAA AT ................................TTT T TT TGCAG AACG GCCAT Dp TCTTCACTCGTGCTCCTA------TCCTGTATTCTTAAAATC--------------------------------TTTCTTGTTGTGCAGCAACGTGCCAT 1101 Dm TGAGCTCGTTCACAAGGCCGCCTTCCGCAACGGCCTGGGCAACTCGATCTACTCGCCCCGCTTCCAGTTGGGCAAGCTGTCCTCCGAGAGCCTGCTGCAC TGAGCT GT CACAAGGC GCCTTCCG A CGGCCTGGGCAACTC ATCTAC CCC G TTCCAG TGGGCAA CT TCC C GA AGCCTGCTGCAC Dp TGAGCTGGTCCACAAGGCTGCCTTCCGTACCGGCCTGGGCAACTCCATCTACATCCCCAGGTTCCAGCTGGGCAATCTTTCCACGGAAAGCCTGCTGCAC 1201 Dm TACGTGGCCCAGACCTTCGCAGCTGGCCGTGCCGCTGTCGTGGGCGTGGGAATCGACAACAACACGCTGGCCGGCTTCGCCCAGACCCTGCAGTTCCCCA TACGTGGCC A ACCTT C GC G CG GC GC GT GT GGCGTGGG AT GACAACAACAC CTG C GGCTTCGCCCAGACCCTG A TTCCC A Dp TACGTGGCCAACACCTTTTCGGCCAGTCGCGCTGCCGTTGTTGGCGTGGGTATTGACAACAACACTCTGTCGGGCTTCGCCCAGACCCTGGAATTCCCAA 1301 Dm GCGGCGGCAGCAAGGCTGCCTCCGCCAACTGGTATGGTGGAGATGCGCGCAAGGACACTTCTGGTCACCGTGCGGTCGTCGCCGTTGCTGGACAGGGCGC GCGGCGG G AAG CTGC TC GC AACT T TGGTGG GATGC CGCAAGGACAC C GG CA CGTGC GTCGCCGTTGCTGG C GGG G Dp GCGGCGGTGGAAAGACTGCATCGGCGAACTACTTTGGTGGCGATGCCCGCAAGGACACCACCGGACAACGTGCCACTGTCGCCGTTGCTGGTCTGGGAGG 1401 Dm CGCCGCATCGAACCACAAGGAAGCGCTGGCATTCGCCATCCTGGAGCAGGCGCTCGGCGCCAAGGCCGCCACCAAGCGCGGCACTTCTGCTGGACTCTTT C C AACC AAGGA GC CT GC TT GCC T CTGGAGCA GC T GGCGC GC GCCACCAAGCG GG A TCT C GGACT TT Dp TTCTATTGCCAACCCAAAGGAGGCCCTTGCCTTTGCCGTGCTGGAGCAAGCTGTAGGCGCTGGTGCGGCCACCAAGCGTGGAAACTCTTCAGGACTGTTC 1501 Dm GGCGAGGCCGTCAACTGCGCCGGCGGCGTCGGAGCC---TCTGTCAAGGCTGTGAATGCCAGCTACTCGGACGCTGGTCTGTTCGGTTTTGTGGTCTCCG GGCGAGGC G CAACT GC GGCGGC G CC...TCTGT A GGCT TGAAT CCAGCTA TCGGA GC GG CT TT GG TT GT GT TCC Dp GGCGAGGCTGCCAACTCTGCTGGCGGCTCGAGGCCCAGCTCTGTTAGGGCTCTGAATACCAGCTATTCGGATGCCGGACTCTTTGGCTTCGTTGTGTCCA 1601 Dm CCGACTCCAAGGACATTGGCAAGACCGTGGAGTTCCTGGTGCGCGGCCTGAAGTCGGCTTCGGTGTCTGATAAGGATGTGGCCAGAGGCAAGGCTCTTCT CGA C AAGGACATTGGCAAGACCGT GAGTTCCTGGT CGCGG TGAAGTC G TTCGGT TC GA AAGGATGTGGCC G GGCAAGGC T CT Dp GCGAGGCAAAGGACATTGGCAAGACCGTCGAGTTCCTGGTTCGCGGTTTGAAGTCTGGTTCGGTTTCGGAAAAGGATGTGGCCCGTGGCAAGGCCTTGCT 1701 Dm GAAGGCGCGCATCATCTCGCGCTACTCGTCGGACGGTGGTCTAATTAAGGAGATCGGTCGCCAGGCGGCGCTCACCCGGAACGTGCTGGAGGCGGACGCC GAAGGC CGCATCATCTCG TA TC TC GA GGTGGTCT AT AAGGAGATCGG CGCCA GCGGCGCTCA C G AACGT TGGAGGC GAC C Dp GAAGGCCCGCATCATCTCGAAGTATTCCTCCGATGGTGGTCTGATCAAGGAGATCGGCCGCCAAGCGGCGCTCAGCAGAAACGTCTTGGAGGCTGACACT 1801 Dm CTGCTTGGCGCAATCGATGGCATCTCGCAGTCGCAGGTCCAGGAGGCGGCCAAGAAGGTGGGCAGCTCCAAGCTGGCCGTCGGCGCCATCGGGCACCTGG TG TTG GC AT GATGGCAT C CAG GCA GTCCAGGAGGC GCCAAGAAGGTGG C GCTC AAGCT C GTCGG GCCAT GG ACCTGG Dp TTGATTGCTGCCATTGATGGCATTACCCAGCAGCAAGTCCAGGAGGCTGCCAAGAAGGTGGCCGGCTCGAAGCTATCGGTCGGTGCCATTGGCAACCTGG 1901 Dm CGAACGTGCCCTACGCCTCCGATTTGGCTTAAGTATATAAACACCTGTACATCTGTTAACCGTAA-TGTAACGACTA--AATAAACCTGATCAAGGGGAT GAACGTGCCCTACGC TC GATTTGGCTTAAGTA A AAAC CC ......CTGTTA CCGTAA.TGTAACGACTA..AATAAAC-TG T A A Dp AGAACGTGCCCTACGCTTCTGATTTGGCTTAAGTAGAAAAACTCCC------CTGTTATCCGTAAATGTAACGACTAAAAATAAACTTGTTGGAATTAA- 2001 Dm CGATCCGCGAACGTAAATACTT CGATCCGCGA A A T Dp CGATCCGCGACAAATGAAATCT

COMPLEX I
13kDa-A 13kDa-B
15kDa 18kDa
19kDa 20kDa
23kDa 24kDa
30kDa 39kDa
42kDa 49kDa
51kDa 75kDa
ACP B8 B12
B14 B14.5a
B14.5b B15
B16.6 B17 B17.2
B18 B22 ASHI
MLRQ MNLL
PDSW SGDH

COMPLEX II
FP Fe-S
CYTb560
CYTb560 small

COMPLEX III
6.4kDa 7.2kDa
11kDa 14kDa
CYTC1 CP1 CP2
Fe-S UQ-B.QP-C

COMPLEX IV
IV Va Vb VIa
VIb VIc VIIa VIIc

COMPLEX V
alpha beta
gamma delta
epsilon b d e
f g OSCP
Cf6 LBP

Peptide alignment

Identity = 83.2% Similarity = 91.6%

   1
Dm MACNASKTSLLRAIAKRGYATCPRPVGDLSAVNVKVLENKLVVATADATLPVSRVSLVLGAGSRNESYDIQGASHLLRLAGGLSTQNSTAFAIARNIQQV
Dp MACNANKTHLLRAIAKRGYATCPRPVGDISAVSVNVLENKLVVATADATVPVSRVSIVLGAGSRNEAYDTLGASHLLRLAGGLSTQNSSAFAIARNIQQV
 
   101
Dm GGTLTTWGDRELVGYTVTTTADNAETGLRYLQDLLQPAFKPWELVDNAKTVVNQLNAVSTEERAIELVHKAAFRNGLGNSIYSPRFQLGKLSSESLLHYV
Dp GGTLTTWGDREVVGYTVETTADNVETGLRYLQDLLQPAFKPWELKDNAKTLHNQLDAVTREQRAIELVHKAAFRTGLGNSIYIPRFQLGNLSTESLLHYV
 
   201
Dm AQTFAAGRAAVVGVGIDNNTLAGFAQTLQFPSGGSKAASANWYGGDARKDTSGHRAVVAVAGQGAAASNHKEALAFAILEQALGAKAATKRGTSAGLFGE
Dp ANTFSASRAAVVGVGIDNNTLSGFAQTLEFPSGGGKTASANYFGGDARKDTTGQRATVAVAGLGGSIANPKEALAFAVLEQAVGAGAATKRGNSSGLFGE
 
   301
Dm AVNCAGGVG-ASVKAVNASYSDAGLFGFVVSADSKDIGKTVEFLVRGLKSASVSDKDVARGKALLKARIISRYSSDGGLIKEIGRQAALTRNVLEADALL
Dp AANSAGGSRPSSVRALNTSYSDAGLFGFVVSSEAKDIGKTVEFLVRGLKSGSVSEKDVARGKALLKARIISKYSSDGGLIKEIGRQAALSRNVLEADTLI
 
   401
Dm GAIDGISQSQVQEAAKKVGSSKLAVGAIGHLANVPYASDLA
Dp AAIDGITQQQVQEAAKKVAGSKLSVGAIGNLENVPYASDLA

DNA alignment

Colour code: UTRs - Coding - Intron(s) - NRG element(s) - Unknown

   1
Dm CTGTATGAATGTAACTGCCAAGGAAAAACATTTGTTAAATTTTTTCACTTAGTCAAATTATTCAAGATCACGATATTTCGAAAATCCCGTGACTTACCAT
      TATG   GT A   .....G A A  AT   TTAAA  TT  CA TT GT A ATTATT  A.AT    ATA  T  A  A C   T A  T C AT
Dp AGCTATGCCCGTGATCT-----GGAGATGATAGTTTAAACCTTAACAGTTTGTAATATTATTTTA-ATATGCATAAATAAAGTAACATTTAATCTCCTAT
 
   101
Dm AAGTCACAGCTGGTACTCGGTGTGACCATTTTGGAGCGCATTGAAAAACTAGGGCTTAGTTGAACCCCGTGCGACGGCCACACTAGCGCGAACGACCG--
      T ...GCT      CG   TGA C   TT GA  G  TTGA A  C A  G      TG     C  G..A    CACA   G GCGAACGA  G..
Dp GCTTG---GCTCAGTTCCGAAATGAACCAGTTCGATTGTTTTGATAGTCGATAGGGCGAGTGGCGAACTAG--ATCTTCACAGCGGAGCGAACGATAGCG
 
   201
Dm ---TAAAAATTTTCGCTCTGCGAATATTTGTAAA---AAATTGCTTAGAAAGCAAATAGAAGAAATTGTAGCATAATCCACGCCATGGCCTGTAACGCTA
   ...TAAAAATTTTCGCTCTGCGA T TTT T AA...AAA TGCTT  AAA CA A   AA A  T GTA  ATAAT  ACGC ATGGCCTG AACGC A
Dp GAGTAAAAATTTTCGCTCTGCGATTTTTTTTTAACAAAAACTGCTTTAAAATCAGACGAAAAAGTTAGTAATATAATTAACGCAATGGCCTGCAACGCAA
 
   301
Dm GCAAGACGTCGCTCCTGCGCGCCATCGCCGTAAGTCTCGACTTAACCAACAAATAGTTACGGCAGCGATTCTTCCCAGCGGAAGGCTCGTGTTACGTAAA
     AAGACG   CTC TGCGCGC ATCGC GTAAGT TC ACTTAACCAA AAA ..TTAC GC        TTCC    GG AG CTCGTGTTACGTAAA
Dp ATAAGACGCATCTCTTGCGCGCTATCGCTGTAAGTTTCAACTTAACCAATAAAA--TTACAGCCAAATAATTTCCACTGGGGAGACTCGTGTTACGTAAA
 
   401
Dm ACACCCCAAG---TTGCCATCTAAACAATGTCGAATGTAAGAAGAATTATAACAATTCCATAATGGTTTTCGGCAGAAACGAGGCTACGCCACCTGCCCG
   A A       ...TT C  T TAAACAAT   GAA G......GA T AT A AAT   A   TG  TTTC  CAGAAACG GGCTA GCCACCTGCCC 
Dp AGATATAGTTGCTTTTCTGTTTAAACAATTATGAAAG------GACTAATGAAAATGTTACCCTGTCTTTCCTCAGAAACGGGGCTATGCCACCTGCCCA
 
   501
Dm CGTCCCGTCGGCGACCTGTCCGCCGTGAACGTCAAGGTGCTGGAGAACAAACTGGTGGTAGCCACCGCCGATGCAACTCTTCCCGTTTCGCGCGTCTCTT
   CG CCCGT GGCGAC T TCCGCCGT A  GT AA GT CT GAGAACAAA TGGT GT GCCAC GC GATGC AC  TTCCCGT TCGCG GT TC  
Dp CGCCCCGTTGGCGACATCTCCGCCGTCAGTGTGAATGTTCTCGAGAACAAATTGGTTGTGGCCACAGCTGATGCCACCGTTCCCGTCTCGCGAGTGTCGA
 
   601
Dm TGGTGCTGGGGTAAGTCAACGGAGCAGTAGACAATCG--CTTGGCGTATCCTAATCGACCAA---------------TTGCAGAGCCGGATCACGAAACG
   T GT  TGGGGT AGT      A      G C   CG..C TG C   T  TA T  A CA ...............TTGCAGAGC GG TC CG AACG
Dp TCGTCTTGGGGTGAGTGGCGACACAGTCTGCCTGCCGGCCCTGCCCAGTGTTATTGCATCACCGTTAATCTGGTTTCTTGCAGAGCTGGTTCCCGTAACG
 
   701
Dm AGTCCTACGACATCCAGGGAGCCTCGCACCTGCTTCGTTTGGCCGGAGGACTGAGCACCCAGAACTCGACCGCCTTCGCCATCGCCCGCAACATCCAGCA
   AG CCTACGA A CC GGGAGC TC CA CTGCT CG TTGGCCGGAGGA TGAGCACCCAGAACTCG C GC TTCGCCAT GCCCGCAACAT CAGCA
Dp AGGCCTACGATACCCTGGGAGCTTCCCATCTGCTCCGCTTGGCCGGAGGATTGAGCACCCAGAACTCGTCTGCTTTCGCCATTGCCCGCAACATTCAGCA
 
   801
Dm GGTGGGCGGTACCCTGACCACATGGGGCGATCGCGAGCTCGTCGGCTACACGGTGACCACCACAGCAGACAACGCCGAGACTGGACTGCGCTATCTGCAG
   GGT GGCGG ACC TGACCAC TGGGGCGATCGCGAG T GTCGGCTACAC GTG   ACCACAGC GACAA G  GAGAC GG CTGCGCTA CTGCAG
Dp GGTCGGCGGCACCTTGACCACCTGGGGCGATCGCGAGGTTGTCGGCTACACCGTGGAGACCACAGCCGACAATGTGGAGACCGGTCTGCGCTACCTGCAG
 
   901
Dm GACCTGCTCCAGCCAGCCTTCAAGCCCTGGGAGTTGGTCGACAATGCCAAAACGGTGGTCAACCAACTGAACGCCGTCTCCACGGAGGTGAGCTCACATG
   GA CTGCT CAGCCAGCCTTCAAGCC TGGGAGTTG   GA AATGC AA AC  TG  CAACCAACTG A GC GTC CC   GAGGT AGC...CAT 
Dp GATCTGCTGCAGCCAGCCTTCAAGCCATGGGAGTTGAAGGATAATGCGAAGACTCTGCACAACCAACTGGATGCTGTCACCCGAGAGGTAAGC---CATT
 
   1001
Dm CCATTAATCATGGATATAGCTGAGTCCTAGCTCCTTAATATAAATGCAACCAAATATTCCTGAATAACTCTTTGTTTTGTCTTTTGCAGGAACGCGCCAT
    C T A TC TG    TA......TCCT   T CTTAA AT ................................TTT  T TT TGCAG AACG GCCAT
Dp TCTTCACTCGTGCTCCTA------TCCTGTATTCTTAAAATC--------------------------------TTTCTTGTTGTGCAGCAACGTGCCAT
 
   1101
Dm TGAGCTCGTTCACAAGGCCGCCTTCCGCAACGGCCTGGGCAACTCGATCTACTCGCCCCGCTTCCAGTTGGGCAAGCTGTCCTCCGAGAGCCTGCTGCAC
   TGAGCT GT CACAAGGC GCCTTCCG A CGGCCTGGGCAACTC ATCTAC   CCC G TTCCAG TGGGCAA CT TCC C GA AGCCTGCTGCAC
Dp TGAGCTGGTCCACAAGGCTGCCTTCCGTACCGGCCTGGGCAACTCCATCTACATCCCCAGGTTCCAGCTGGGCAATCTTTCCACGGAAAGCCTGCTGCAC
 
   1201
Dm TACGTGGCCCAGACCTTCGCAGCTGGCCGTGCCGCTGTCGTGGGCGTGGGAATCGACAACAACACGCTGGCCGGCTTCGCCCAGACCCTGCAGTTCCCCA
   TACGTGGCC A ACCTT  C GC  G CG GC GC GT GT GGCGTGGG AT GACAACAACAC CTG C GGCTTCGCCCAGACCCTG A TTCCC A
Dp TACGTGGCCAACACCTTTTCGGCCAGTCGCGCTGCCGTTGTTGGCGTGGGTATTGACAACAACACTCTGTCGGGCTTCGCCCAGACCCTGGAATTCCCAA
 
   1301
Dm GCGGCGGCAGCAAGGCTGCCTCCGCCAACTGGTATGGTGGAGATGCGCGCAAGGACACTTCTGGTCACCGTGCGGTCGTCGCCGTTGCTGGACAGGGCGC
   GCGGCGG  G AAG CTGC TC GC AACT  T TGGTGG GATGC CGCAAGGACAC  C GG CA CGTGC    GTCGCCGTTGCTGG C GGG G 
Dp GCGGCGGTGGAAAGACTGCATCGGCGAACTACTTTGGTGGCGATGCCCGCAAGGACACCACCGGACAACGTGCCACTGTCGCCGTTGCTGGTCTGGGAGG
 
   1401
Dm CGCCGCATCGAACCACAAGGAAGCGCTGGCATTCGCCATCCTGGAGCAGGCGCTCGGCGCCAAGGCCGCCACCAAGCGCGGCACTTCTGCTGGACTCTTT
     C     C AACC  AAGGA GC CT GC TT GCC T CTGGAGCA GC  T GGCGC    GC GCCACCAAGCG GG A  TCT C GGACT TT 
Dp TTCTATTGCCAACCCAAAGGAGGCCCTTGCCTTTGCCGTGCTGGAGCAAGCTGTAGGCGCTGGTGCGGCCACCAAGCGTGGAAACTCTTCAGGACTGTTC
 
    1501
Dm GGCGAGGCCGTCAACTGCGCCGGCGGCGTCGGAGCC---TCTGTCAAGGCTGTGAATGCCAGCTACTCGGACGCTGGTCTGTTCGGTTTTGTGGTCTCCG
   GGCGAGGC G CAACT  GC GGCGGC    G  CC...TCTGT A GGCT TGAAT CCAGCTA TCGGA GC GG CT TT GG TT GT GT TCC 
Dp GGCGAGGCTGCCAACTCTGCTGGCGGCTCGAGGCCCAGCTCTGTTAGGGCTCTGAATACCAGCTATTCGGATGCCGGACTCTTTGGCTTCGTTGTGTCCA
 
   1601
Dm CCGACTCCAAGGACATTGGCAAGACCGTGGAGTTCCTGGTGCGCGGCCTGAAGTCGGCTTCGGTGTCTGATAAGGATGTGGCCAGAGGCAAGGCTCTTCT
    CGA  C AAGGACATTGGCAAGACCGT GAGTTCCTGGT CGCGG  TGAAGTC G TTCGGT TC GA AAGGATGTGGCC G GGCAAGGC  T CT
Dp GCGAGGCAAAGGACATTGGCAAGACCGTCGAGTTCCTGGTTCGCGGTTTGAAGTCTGGTTCGGTTTCGGAAAAGGATGTGGCCCGTGGCAAGGCCTTGCT
 
   1701
Dm GAAGGCGCGCATCATCTCGCGCTACTCGTCGGACGGTGGTCTAATTAAGGAGATCGGTCGCCAGGCGGCGCTCACCCGGAACGTGCTGGAGGCGGACGCC
   GAAGGC CGCATCATCTCG   TA TC TC GA GGTGGTCT AT AAGGAGATCGG CGCCA GCGGCGCTCA C G AACGT  TGGAGGC GAC C 
Dp GAAGGCCCGCATCATCTCGAAGTATTCCTCCGATGGTGGTCTGATCAAGGAGATCGGCCGCCAAGCGGCGCTCAGCAGAAACGTCTTGGAGGCTGACACT
 
   1801
Dm CTGCTTGGCGCAATCGATGGCATCTCGCAGTCGCAGGTCCAGGAGGCGGCCAAGAAGGTGGGCAGCTCCAAGCTGGCCGTCGGCGCCATCGGGCACCTGG
    TG TTG  GC AT GATGGCAT  C CAG  GCA GTCCAGGAGGC GCCAAGAAGGTGG C GCTC AAGCT  C GTCGG GCCAT GG  ACCTGG
Dp TTGATTGCTGCCATTGATGGCATTACCCAGCAGCAAGTCCAGGAGGCTGCCAAGAAGGTGGCCGGCTCGAAGCTATCGGTCGGTGCCATTGGCAACCTGG
 
   1901
Dm CGAACGTGCCCTACGCCTCCGATTTGGCTTAAGTATATAAACACCTGTACATCTGTTAACCGTAA-TGTAACGACTA--AATAAACCTGATCAAGGGGAT
    GAACGTGCCCTACGC TC GATTTGGCTTAAGTA A AAAC CC ......CTGTTA CCGTAA.TGTAACGACTA..AATAAAC-TG T  A    A 
Dp AGAACGTGCCCTACGCTTCTGATTTGGCTTAAGTAGAAAAACTCCC------CTGTTATCCGTAAATGTAACGACTAAAAATAAACTTGTTGGAATTAA-
 
   2001
Dm CGATCCGCGAACGTAAATACTT
   CGATCCGCGA      A A  T
Dp CGATCCGCGACAAATGAAATCT