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COMPLEX V - alpha subunit
COMPLEX I
13kDa-A   13kDa-B
15kDa
  18kDa
19kDa
  20kDa
23kDa   24kDa
30kDa
  39kDa
42kDa
  49kDa
51kDa   75kDa
ACP
  B8   B12
B14   B14.5a
B14.5b   B15
B16.6
  B17   B17.2
B18   B22   ASHI
MLRQ   MNLL
PDSW   SGDH

COMPLEX II

FP  
Fe-S
CYTb560
CYTb560 small


COMPLEX III
6.4kDa   7.2kDa
11kDa   14kDa
CYTC1   
CP1   CP2
Fe-S
  UQ-B.QP-C

COMPLEX IV
IV   Va   Vb   VIa
VIb
  VIc   VIIa   VIIc

COMPLEX V
alpha   beta
gamma
  delta
epsilon
   b   d   e
f
  g   OSCP
Cf6
  LBP

Peptide alignment
Identity = 92.4%     Similarity = 97.5%
   1
Dm MSIFSARLASSVARNLPKAANQVACKAAYPAASLAARKLHVASTQRSAEISNILEERILGVAPKADLEETGRVLSIGDGIARVYGLNNIQADEMVEFSSG
Dp MSMISARLASSVARTLPKSAAQIACKVAYPASTLAARKFHVASTQRSAEISSVLEERILGISPKADLEETGRVLSIGDGIARVYGLNNVQADEMVEFSSG

101
Dm LKGMALNLEPDNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGAINTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP
Dp LKGMSLNLEADNVGVVVFGNDKLIKQGDIVKRTGAIVDVPVGYELLGRVVDALGNAIDGLGAIDTKDRFRVGIKAPGIIPRVSVREPMQTGIKAVDSLVP

201
Dm IGRGQRELIIGDRQTGKTALAIDTIINQKRFNEAQDESKKLYCIYVAIGQKRSTVAQIVKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFR
Dp IGRGQRELIIGDRQTGKTALAIDTIINQKRFNDAQEESKKLYCIYVAIGQKRSTVAQMLKRLTDAGAMKYTIIVSATASDAAPLQYLAPYSGCAMGEFFR

301
Dm DKGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY
Dp DKGKHALIIYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFY

401
Dm KGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMDP
Dp KGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGYLDKMDP

501
Dm AKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIVAKFMSTFQG
Dp GKITNFEKEFLQLMKTSEQGLLDTIAKEGAISEATDAKLKDIVSKFLATFQG
DNA alignment
Colour code:   UTRs    -   Coding   -   Intron(s)   -   NRG element(s)   -   Unknown
   1
Dm AATCACCAGCACTTCGGCCGTTTCCCAGCACTGCCTCACCGAACGTCTGGCCAGCGACCATCTTGTGAAAAGTACTACGAGTGTGGAGAGGAGTTGGCTT
ATC CAG A C C T C A G CA CGA T T A C...T TGAAAA CTACGAG....GAGAGGAGTTGG T
Dp CATCGGCAGAAAAACATCGATGCTCGATGCTCGATGCATCGATGTTTTTCTTACATCAC---TATTGAAAAAGTCTACGAG----GAGAGGAGTTGGTGT

101
Dm AGGAATTGTACAATTACTT-CTGCGGCGAAC-AGTTAAAAAGCATTAAAAATGTCGATTTTTTCCGCCCGCCTGGCGTCCTCGGTCGCCCGTAACCTGCC
GGAATT T AATTA TT.CTGCGGC AA .AGTTAAAAAG AT AAAATGTCGAT TTTC GC CGC TGGCGTC TCGGTCGC CG A C TGCC
Dp GGGAATTATTTAATTATTTTCTGCGGCAAAAGAGTTAAAAAGTATAGAAAATGTCGATGATTTCTGCACGCTTGGCGTCGTCGGTCGCGCGCACCTTGCC

201
Dm CAAGGCTGCCAACCAGGTACCGCACCGAATTCCAGAAATTAAATCGCCCGACGAAGAGTTGGCGAAAAAGTGTAATACATAA-----CCGAATCGATGGG
CAAG C GCC CAGGTA ......AA C GAAA..AA C CG C AA A TT GC A A GT ATACATAA.....CC AAT G G G
Dp CAAGTCGGCCGCACAGGTATT------AAAAACTGAAA--AACAGCCACGGCAAAAAATTTGCATATAGAAGTTATACATAATCCCACCCAATTGCCGAG

301
Dm GTACTTTGCAGAAAATTAGTGCATCCGGGTGGTTCAAAGATCG-ATCGAACTGTGGATAAAGACTTTCTGGATGCGTAGCAAGTATTCGGGTGGGATTTT
A TT GC A AA AGTGCA CC A GAT .A G A GT G AGACT C G GCG..GC AG G T GG TTTT
Dp AGAATTGGCGAAGAAAAAGTGCAGCCTAAGTAGAAATGGATTATAAAGCATGGTTGGAGGAGACTCCCCAGTAGCG--GCCAGCGGATCGCTTGGTTTTT

401
Dm GTACCATTTTCCAACAAGAATTTAGTGTTACGCAATGCGGCGAATTGCA-AGGCGGCCGCTGAAATTGTGG-------GTTACATAATCAGTGCCAACCG
C TTT C..CAAGAATTT.GTGTTACGCAAT CGGC AA C .A CGGCCG ....AT GTGG.......GTTACATAA A GC AA..G
Dp CAGCGTTTTGGC--CAAGAATTT-GTGTTACGCAATTCGGCAAAAATCGTAAACGGCCGG----ATGGTGGCTCCTCTGTTACATAACTATCGCTAA--G

501
Dm AGAATTTGCTAAGCAAAACAGAGTTTTTGGTTATTTTTTCAGTAAAAGTGTGCGAAGAACGCTGCAATGT-CTTTGTTTTTGTCCTCACATTACATAATT
A T G A AAA G TTT G T T CA AA TGTG AGAA GCAA GT.C TT TT TGT A ATTACATAATT
Dp ATGTCTAGGAACTTGAAATTGCAATTTGGTAGCTAATCGCATAGTAATTGTGACTAGAAACGCGCAAGGTGCATTTGTTGTGTAGAAATATTACATAATT

601
Dm GTGATG---------------TGGGTGAGATGCGGTGCCCGAAAAGTTTGAGGTTAGGTGCGGCTGTCAAGCAAGTGGTGAAGGTGGAAAGAATACAAAG
TG ...............T GG G TG CC AAAAGT TGAGGTTA GTGC ...AGCAAGTG GA G A A A G
Dp TTGGGTATGTCGGCTTCGCCATCGGCTCGTTGGCAGTACCCAAAAGTGTGAGGTTATGTGCAAGGC---AGCAAGTGTCGAGCCAGCAGTTGAGTGCATG

701
Dm TGGGGAAGTGCCGACATCCAGATACCCTGTAATCAG-----------TTTTTTTTTTTATTAACTAGCTAGAAAGTACTGGAGAGAAGTTATTGAACGAT
GGGG GTGC GA A AT AA A ...........TT T TATTA AAA AC A AG AG T A C
Dp AGGGGGTGTGCGGAGACTAGAATTGGTAAAAAAAAAAGCCGTAGAGTTTCGTGAACCTATTATTCGTGGGTAAAAAACCACAAAGCAGATGAAAAGCTGG

801
Dm CGTACCCTGCG-----GTTATCCAACGACA------------CGGACCTACA--CCTTACATAATC---------------TCGCATAATCATATCGATT
GT CC G G.....GTTA CAAC AC ............CG AC AC ..CCTTACATAA C...............TC A TC TCGATT
Dp TGTCCCTCGTGTAGTGGTTACTCAACTACGGCACATTCCCTCCGCACACACTGGCCTTACATAAGCGAAATTGTTAGTAATTCCGGAACTCGATTCGATT

901
Dm AACCTACTCTCTTACAGGTCGCCTGCAAAGCCGCTTATCCCGCCGCCAGTCTTGCTGCCCGCAAGCTCCATGTGGCCAGCACGCAGCGTAGCGCTGAGAT
..CTA TCTCTT CAG T GCCTGCAA G GC TA CC GC CCA TCT GCTGCCCG AAG TCCATGT GCCAGCAC CAGCG AGCGC GA AT
Dp G--CTATTCTCTTCCAGATTGCCTGCAAGGTTGCGTACCCAGCTTCCACTCTCGCTGCCCGTAAGTTCCATGTTGCCAGCACACAGCGCAGCGCGGAAAT

1001
Dm CTCCAACATCCTGGAGGAGCGCATCCTGGGCGTCGCCCCCAAGGCTGATCTGGAGGAAACCGGCCGTGTGCTGAGCATCGGTGACGGTATCGCCCGTGTC
CTC C TCCTGGAGGAG G ATCCTGGGC T C CCCAAGGC GATCTGGAGGAAACCGG CGTGTGCTGAGCAT GGTGACGGTATCGC CGTGTC
Dp CTCTTCCGTCCTGGAGGAGAGAATCCTGGGCATTTCGCCCAAGGCCGATCTGGAGGAAACCGGTCGTGTGCTGAGCATTGGTGACGGTATCGCTCGTGTC

1101
Dm TACGGTCTGAACAACATCCAGGCCGATGAGATGGTGGAGTTCTCCTCCGGACTGAAGGGCATGGCCCTTAACTTGGAGCCCGACAACGTCGGTGTTGTGG
TA GG CTGAACAAC T CAGGCCGATGAGATGGTGGAGTTCTCCTCCGG TGAAGGGCATG CCCT AACTTGGAG CCGACAA GTCGGTGT GT G
Dp TATGGCCTGAACAACGTGCAGGCCGATGAGATGGTGGAGTTCTCCTCCGGTTTGAAGGGCATGTCCCTCAACTTGGAGGCCGACAATGTCGGTGTGGTCG

1201
Dm TCTTCGGTAACGATAAGCTGATCAAGCAGGGCGATATCGTCAAGCGTACCGGTGCCATCGTGGATGTGCCCGTCGGTGATGAGCTGCTGGGTCGCGTCGT
TCTTCGGTAACGA AAGCTGATCAAGCAGGGCGATAT GTCAAGCGTAC GG GCCAT GT GATGT CC GTCGGT ATGAGCTGCTGGGTCGCGT GT
Dp TCTTCGGTAACGACAAGCTGATCAAGCAGGGCGATATTGTCAAGCGTACTGGCGCCATTGTCGATGTCCCAGTCGGTTATGAGCTGCTGGGTCGCGTTGT

1301
Dm CGATGCCCTGGGAAATGCCATCGACGGCAAGGGTGCCATCAACACCAAGGACCGTTTCCGTGTGGGAATCAAGGCCCCCGGCATCATCCCCCGTGTGTCC
CGA GC CTGGG AA GCCATCGACGGC GGG GCCATC ACACCAAGGACCG TTCCGTGT GG ATCAAGGCCCCCGGCATCAT CCCCGTGTGTC
Dp CGACGCTCTGGGTAACGCCATCGACGGCCTGGGCGCCATCGACACCAAGGACCGCTTCCGTGTCGGCATCAAGGCCCCCGGCATCATTCCCCGTGTGTCT

1401
Dm GTGCGCGAGCCCATGCAGACCGGTATCAAGGCCGTCGACTCCCTGGTGCCCATCGGTCGTGGTCAGCGTGAGCTGATCATTGGCGATCGTCAGACTGGGT
GTGCGCGAGCCCATGCAGACCGG ATCAAGGC GT GACTC CTGGTGCCCATCGGTCGTGG CAGCGTGAGCTGATCAT GGCGA G CAGACTGGGT
Dp GTGCGCGAGCCCATGCAGACCGGAATCAAGGCTGTGGACTCTCTGGTGCCCATCGGTCGTGGCCAGCGTGAGCTGATCATCGGCGACAGGCAGACTGGGT

1501
Dm AAGATTCTGGAGATAACCAAACCATGACACACCATTTCTCAATTGCTAGCAAGCAAAATTTAACCAAACAATTTTGTATTTAATCTGCAGTAAGACCGCT
AAG....TGG GA.....A A C AC CAC TTTCTC A........A A T TAACC A TTT..........TGCAG AAGAC GCT
Dp AAG----TGGTGA-----AGAGCTCTACCCACAGTTTCTCCA--------ACTGACTCTGTAACCTGATCGCTTT----------TGCAGAAAGACTGCT

1601
Dm CTGGCCATCGACACCATCATCAACCAGAAGCGCTTCAACGAGGCCCAGGACGAGTCCAAGAAGCTGTACTGCATCTACGTCGCCATTGGCCAGAAGCGTT
CTGGCCAT GA ACCATCATCAACCAGAAGCG TTCAACGA GCCCAGGA GAGTCCAAGAAGCTGTACTGCATCTACGT GCCATTGGCCAGAAGCGTT
Dp CTGGCCATTGATACCATCATCAACCAGAAGCGTTTCAACGACGCCCAGGAGGAGTCCAAGAAGCTGTACTGCATCTACGTTGCCATTGGCCAGAAGCGTT

1701
Dm CCACCGTCGCCCAGATCGTGAAGCGTCTGACCGACTCCGGCGCCATGGGCTACTCCGTGATCGTGTCGGCCACCGCCTCCGACGCTGCTCCTCTGCAGTA
CCAC GTCGCCCAGAT TGAAGCGTCTGAC GAC CCGGCGCCATG TAC CC T AT GTGTC GCCACCGC TC GA GC GCTCC CTGCAGTA
Dp CCACTGTCGCCCAGATGCTGAAGCGTCTGACTGACGCCGGCGCCATGAAGTACACCATTATTGTGTCTGCCACCGCTTCGGATGCCGCTCCCCTGCAGTA

1801
Dm CTTGGCCCCCTACTCCGGATGCGCCATGGGAGAGTACTTCCGCGACAAGGGCAAGCACGCCCTGATCATCTACGATGATTTGTCCAAGCAGGCTGTGGCC
TGGC CCCTACTCCGG TGCGCCATGGG GAGT CTTCCGCGACAAGGG AAGCACGC CTGATCATCTACGA GATTTGTCCAAGCA GC GT GCC
Dp TCTGGCTCCCTACTCCGGTTGCGCCATGGGCGAGTTCTTCCGCGACAAGGGAAAGCACGCTCTGATCATCTACGACGATTTGTCCAAGCATGCCGTCGCC

1901
Dm TACCGTCAGATGTCCCTGTTGCTGCGTCGTCCCCCAGGTCGTGAGGCCTACCCCGGTGATGTGTTCTACCTGCATTCGCGTCTGCTGGAGCGTGCCGCCA
TACCGTCAGATGTC CTG TGCTGCGTCGTCCCCCAGGTCGTGAGGCCTACCCCGGTGATGTGTTCTACCT CA TC CGTCT TGGAGCGTGCCGCCA
Dp TACCGTCAGATGTCTCTGCTGCTGCGTCGTCCCCCAGGTCGTGAGGCCTACCCCGGTGATGTGTTCTACCTTCACTCCCGTCTCTTGGAGCGTGCCGCCA

2001
Dm AGATGTCCCCCGCCATGGGAGGCGGTTCCCTGACTGCTCTGCCCGTGATCGAGACCCAGGCTGGCGATGTGTCCGCCTACATTCCAACCAACGTCATCTC
AGATGTCCCCCGCCATGGGAGG GG TCCCTGACTGC CTGCCCGT AT GAGACCCAGGC GG GATGTGTCCGCCTACATTCCAACCAACGTCAT TC
Dp AGATGTCCCCCGCCATGGGAGGTGGATCCCTGACTGCCCTGCCCGTTATTGAGACCCAGGCCGGTGATGTGTCCGCCTACATTCCAACCAACGTCATTTC

2101
Dm GATTACCGACGGACAGATCTTCTTGGAGACCGAGTTGTTCTACAAGGGTATCCGCCCTGCCATTAACGTCGGTCTGTCCGTGTCCCGTGTGGGTTCCGCT
GAT AC GACGG CAGATCTTCTTGGA ACCGAGTTGTTCTACAAGGGTATCCG CC GCCAT AACGTCGGTCT TC GT TCCCGTGT GG TCCGCT
Dp GATCACTGACGGCCAGATCTTCTTGGAAACCGAGTTGTTCTACAAGGGTATCCGTCCCGCCATCAACGTCGGTCTCTCTGTCTCCCGTGTCGGCTCCGCT

2201
Dm GCCCAGACCAAGGCCATGAAGCAGGTGGCCGGTTCCATGAAGCTGGAGTTGGCCCAGTACCGTGAGGTCGCTGCCTTCGCCCAGTTCGGTTCCGATCTGG
GCCCAGACCAAGGCCATGAAGCAGGT GCCGG TCCATGAAGCTGGAGTTGGC CAGTACCGTGAGGTCGCTGCCTTCGC CAGTTCGGTTC GAT TGG
Dp GCCCAGACCAAGGCCATGAAGCAGGTTGCCGGCTCCATGAAGCTGGAGTTGGCTCAGTACCGTGAGGTCGCTGCCTTCGCTCAGTTCGGTTCTGATTTGG

2301
Dm ATGCCGCCACCCAGCAGCTGCTGAACCGTGGTGTGCGCCTCACTGAGCTGCTCAAGCAGGGTCAGTACGTGCCCATGGCCATTGAGGATCAGGTGTGTAT
ATGCC CCACCCAGCAGCTGCTGAACCGTGGTGTGCG CT ACTGAGCTGCTCAAGCAGGG CAGTACGTGCCCATGGCCATTGAGGATCAGGTG GTA
Dp ATGCCTCCACCCAGCAGCTGCTGAACCGTGGTGTGCGTCTGACTGAGCTGCTCAAGCAGGGACAGTACGTGCCCATGGCCATTGAGGATCAGGTGCGTAG

2401
Dm GCCAGGACTTACCTAGCAACTAACTTATATCCGTAGTGACAACGCGGATATCGCGATTCCCGTGTAAAACCCAACCTCTAATCACCCAACATCAAATCTT
C A T......GCAAC ......T T CG GTG C .............................C AA CTCT T C C............T
Dp CCTATTGAT------GCAACC------TCTGCGATGTGGCT-----------------------------CTAATCTCTTCTTCCAC------------T

2501
Dm CCAGGTCGCCGTTATCTACTGCGGTGTGCGCGGTCATCTGGACAAGATGGATCCCGCCAAGATCACCAAGTTCGAGAAGGAGTTCTTGCAGCACATCAAG
C AGGT GC GT ATCTACTGCGG GTGCG GGT A TGGACAAGATGGA CCCG CAAGATCACCAA TTCGAGAAGGAGTTCTTGCAGC CAT AAG
Dp CAAGGTTGCTGTCATCTACTGCGGCGTGCGTGGTTACTTGGACAAGATGGACCCCGGCAAGATCACCAACTTCGAGAAGGAGTTCTTGCAGCTCATGAAG

2601
Dm ACCTCCGAGCAGGCTCTGCTCGACACCATCGCCAAGGACGGTGCTATCTCGGAGGCGTCCGATGCCAAGCTGAAGGACATTGTTGCCAAGTTCATGTCCA
ACC CGAGCAGG TCTGCTCGACACCAT GCCAAGGA GG GCTATCTC GAGGC CCGATGCCAAGCTGAAGGA ATTGTT CCAAGTTC TG CCA
Dp ACCAGCGAGCAGGGTCTGCTCGACACCATTGCCAAGGAGGGCGCTATCTCTGAGGCCACCGATGCCAAGCTGAAGGATATTGTTTCCAAGTTCTTGGCCA

2701
Dm CCTTCCAGGGTTAAGCAT-----CAGCAGCAAACGAAGA--------ATAGGAGTAGCGGTGCGTGCAATTAACATCATAGATGGCTCGAATAA------
CCTTCCAGGGTTA AT.....CA CAG AAC G ........AT AG GCGG G.G G ATTA C T A AG G TC A AA......
Dp CCTTCCAGGGTTAGAAATTGTAACATCAGTCAACCGCGCGGTTTAACATCTTAGATGCGGCG-GAGAGATTACCCTAAAAGCAAGATCAATAAAGTAGAA

2801
Dm -----------------------------------TGCTGCC-ATCCCTGCGCGCC---------ATCAACAACAACA--------AATAACAACCTACA
...................................T CTGCC.AT C GCGCGC .........ATCAA AA AACA........AA A CTACA
Dp TATTGTCTAAGTCGAAAGTCCCCTAACAATTTCATTACTGCCCATTGCCGCGCGCAGATCTAATAATCAAGAATAACATCATAAAGAAGCCTACACTACA

2901
Dm ACTTAAGATAAA-CAGAAATTATAAAACAAAAACAAGAGAAAACTCCTTTGCACATTCATGTTTTCCTGCGCATCCTGACTGGATCGATCGCCTTCAATC
ACTTAAGATAAA.CA AAATTATA AA AAAAA....AGAAAAC C TTTGC CATTCATGTTTTCCTGCG TCC G C CG C CC CA
Dp ACTTAAGATAAATCAAAAATTATACAAAAAAAA----AGAAAACCCTTTTGCGCATTCATGTTTTCCTGCGTTTCCAGCCATCTCCGTGCCCCGACACGT

3001
Dm CGTGGTTCGGTGCCATTATGCCGCAAAATCTTGGGAGAGAGAGAGC-CGGCCCTGGCTACGGAGTGGACGGCGAGCCCCAGCCGGATGCACTTTCGAGTT
CG CG C A .ATGCC CAAA.TCTTGGGAGAGAG GAG .C G C G CGG G GGC G G CGGAT CA TTTCGA TT
Dp CGCCCAACGCCACAAA-ATGCCACAAA-TCTTGGGAGAGAGGGAGAGCAGGGCGGAAGGCGGCGGACGGGGCACGGAATGGACGGATCCAGTTTCGAATT

3101
Dm TCAGCGAAAAATCCTTGCGGTTCCTCCAACCTCCAAAACGATAGATAATCCCCCGTTGTTCTTCTACCTAA----AATATGTAATCAATATTTGAAATAT
TCAGCGA A..TCC TG GGTTC TCCAACC A A ..A GATAAT .TTGTTCTTCTACC A....A T TGTAATCAATATTT AAATAT
Dp TCAGCGACA--TCCGTGTGGTTCTTCCAACCATAAGAT--AATGATAATGATAA-TTGTTCTTCTACCCTAAAAAATTGTGTAATCAATATTTTAAATAT

3201
Dm TGTAATCGAGAATAGTCGAAATAATGTCTGAGGATGATTGTGAAACGATGATGAATTAAAA-CGATACTAAATTATACTCTAAA
TGTAATCGAGAATAGTCGAA.TA TGTCTG GGATGATTGTGAAACGATGATGAA TAAAA.CGATACTAAATTATACT TAAA
Dp TGTAATCGAGAATAGTCGAA-TACTGTCTGTGGATGATTGTGAAACGATGATGAAATAAAAACGATACTAAATTATACTTTAAA